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scn_reactorb_scaffold_142208

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_142208_1
unknown

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

scn_reactorb_scaffold_142208_2

Not on your lists

comp(137..3559)
DNA (3423bp) protein (1141aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLY4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95936.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scn_reactorb_scaffold_142208_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3577..4182)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKR5_THIA3
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ87533.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scn_reactorb_scaffold_142208_4

Not on your lists

comp(4218..5579)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLY6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH95455.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative type 4 fimbrial biogenesis pilw-like protein transmembrane
scn_reactorb_scaffold_142208_5
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5581..6093)
DNA (513bp) protein (171aa)
Putative Tfp pilus assembly protein PilV n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKR7_THIA3
putative Tfp pilus assembly protein PilV
Putative Tfp pilus assembly protein PilV {ECO:0000313|EMBL:CAZ87535.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scn_reactorb_scaffold_142208_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6093..6641)
DNA (549bp) protein (183aa)
Putative Tfp pilus assembly protein, major pilin PilA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CKR8_THIA3
Putative Tfp pilus assembly protein, major pilin PilA
Putative Tfp pilus assembly protein, major pilin PilA {ECO:0000313|EMBL:CAZ87536.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scn_reactorb_scaffold_142208_7

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comp(6638..7138)
DNA (501bp) protein (167aa)
Putative Type II secretory pathway protein H n=1 Tax=mine drainage metagenome RepID=E6PKK1_9ZZZZ
Putative Type II secretory pathway protein H {ECO:0000313|EMBL:CBH95452.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pilE; Type IV pilus biogenesis protein PilE
scn_reactorb_scaffold_142208_8
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..7676
DNA (480bp) protein (160aa)
Helix-turn-helix protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIC1_METAL
Uncharacterized protein {ECO:0000313|EMBL:CDS51209.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
DNA-binding protein
scn_reactorb_scaffold_142208_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7976..8977
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003658B78
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
scn_reactorb_scaffold_142208_10
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9051..9752
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036D8ECD
Polysaccharide biosynthesis glycosyl transferase CpsJ {ECO:0000313|EMBL:BAQ61470.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
family 2 glycosyl transferase
scn_reactorb_scaffold_142208_11
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9749..11530
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035D5DD8
HPr kinase
Tax=BJP_IG2069_Syntrophobacterales_46_30
scn_reactorb_scaffold_142208_12
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11556..12230
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00035D5DD8
glycosyl transferase family protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
scn_reactorb_scaffold_142208_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12230..12703
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLZ8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70055.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
scn_reactorb_scaffold_142208_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12735..14495
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003627AE9
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIF47260.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scn_reactorb_scaffold_142208_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14568..15554)
DNA (987bp) protein (329aa)
magnesium transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037CD3D4
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
magnesium and cobalt transport protein CorA
scn_reactorb_scaffold_142208_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15728..16450)
DNA (723bp) protein (241aa)
Phage SPO1 DNA polymerase-related protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TVX0_ACIAC
phage SPO1 DNA polymerase-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scn_reactorb_scaffold_142208_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..16935)
DNA (495bp) protein (165aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSB2_9BURK
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EHL24754.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
ribosomal-protein-alanine acetyltransferase
scn_reactorb_scaffold_142208_18
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16932..17666)
DNA (735bp) protein (245aa)
Peptidase M22, glycoprotease n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCS1_ACISJ
peptidase M22, glycoprotease
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABM44046.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scn_reactorb_scaffold_142208_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17782..19239
DNA (1458bp) protein (486aa)
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4)
peptidase M15 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F3CB8
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAD23364.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scn_reactorb_scaffold_142208_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19345..20901
DNA (1557bp) protein (519aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TW73_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86789.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_142208_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20932..21627
DNA (696bp) protein (232aa)
OmpW family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TW72_ALIDB
OmpW family protein
OmpW family protein {ECO:0000313|EMBL:AEB86788.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scn_reactorb_scaffold_142208_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21692..22654)
DNA (963bp) protein (321aa)
hypothetical protein id=12550790 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_142208_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22700..23689)
DNA (990bp) protein (330aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
translation factor Sua5 n=1 Tax=Acidovorax avenae RepID=UPI0002DF7430
Sua5/YciO/YrdC/YwlC family protein
scn_reactorb_scaffold_142208_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23692..24864)
DNA (1173bp) protein (391aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUX1_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scn_reactorb_scaffold_142208_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24861..25355)
DNA (495bp) protein (165aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6G9_9BURK
scn_reactorb_scaffold_142208_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25455..26363
DNA (909bp) protein (303aa)
Thioredoxin n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ9_ACIET
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACM34708.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_142208_27
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26368..27195
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ8_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34707.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scn_reactorb_scaffold_142208_28
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27202..28125)
DNA (924bp) protein (308aa)
phosphoribosylaminoimidazole succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAC7_ACIDE
scn_reactorb_scaffold_142208_29
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28390..28722
DNA (333bp) protein (111aa)
Ribosomal subunit interface protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EEJ2_9BURK
Ribosome hibernation promoting factor {ECO:0000313|EMBL:KJA10148.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
sigma 54 modulation protein/ribosomal protein S30EA
scn_reactorb_scaffold_142208_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28918..29400
DNA (483bp) protein (161aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6G5_9BURK
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying items 1-30 of 45 in total

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