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scn_reactorb_scaffold_142208_29

Organism: SCN_bioreactor_inoc_reactorb_Betaproteobacteria_68_25

near complete RP 50 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 28390..28722

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EEJ2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 107.0
  • Bit_score: 190
  • Evalue 5.60e-46
Ribosome hibernation promoting factor {ECO:0000313|EMBL:KJA10148.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 194
  • Evalue 7.10e-47
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 7.80e-46

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGAACTTGACGATCAGCGGTCACCACCTCGAAGTCACCCCCGCCTTGCGTAGCTATGTCATGACCAAGCTGGATCGGATCACCCGCCACTTCGACCAGGTGGTGGACGTGAAAGTGCTTTTGTCGGTCGAGAAGCAAAAGGAGAAGGAAAAGCGGCAACGCGCCGAGTGCAATGTGCGCGTCAAGGGCAACGACCTGTTCGCCGAGAGTGCCCACTCGGATCTGTACGCCGCCGTGGACGAGCTGGTGGACAAGCTCGACCGCATCGTCGTGCGCCACAAGAACCGGCTGCAGGACCACCAGGCCGATGCGCTCAAGCGTGCCTACGCCTGA
PROTEIN sequence
Length: 111
MNLTISGHHLEVTPALRSYVMTKLDRITRHFDQVVDVKVLLSVEKQKEKEKRQRAECNVRVKGNDLFAESAHSDLYAAVDELVDKLDRIVVRHKNRLQDHQADALKRAYA*