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scn_reactorb_scaffold_74415

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_74415_1
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..694
DNA (693bp) protein (231aa)
Cell division protein FtsZ n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWY0_CLOA9
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_74415_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

928..2526
DNA (1599bp) protein (533aa)
ABC transporter related protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JP26_CELLD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADZ83640.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
scn_reactorb_scaffold_74415_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2545..4344
DNA (1800bp) protein (600aa)
UPF0313 protein Curi_c05850 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWP7_CLOA9
UPF0313 protein Y919_11020 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
radical SAM domain-containing protein
scn_reactorb_scaffold_74415_4
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4561..5811
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI0003120C8D
Capsule biosynthesis protein capA {ECO:0000313|EMBL:EXJ22950.1}; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
poly-gamma-glutamate biosynthesis protein
scn_reactorb_scaffold_74415_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5842..6684
DNA (843bp) protein (281aa)
DNA integrity scanning domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B249_CLOA9
Membrane protein {ECO:0000313|EMBL:KGG80100.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
DNA integrity scanning domain-containing protein
scn_reactorb_scaffold_74415_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6665..7951
DNA (1287bp) protein (429aa)
Putative secreted protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSG1_9CLOT
Putative secreted protein {ECO:0000313|EMBL:EOC99643.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scn_reactorb_scaffold_74415_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8044..9465
DNA (1422bp) protein (474aa)
Transcriptional regulator BkdR of isoleucine and valine catabolism operon n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AR59_9CLOT
Transcriptional regulator BkdR of isoleucine and valine catabolism operon {ECO:0000313|EMBL:EOC99642.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Fis family sigma-54 specific transcriptional regulator
scn_reactorb_scaffold_74415_8
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9651..10547
DNA (897bp) protein (299aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphotransbutyrylase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBE1_9CLOT
Phosphate butyryltransferase {ECO:0000313|EMBL:KGG80103.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
scn_reactorb_scaffold_74415_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10641..11714
DNA (1074bp) protein (358aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
buk2; butyrate kinase 1 (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSF7_9CLOT
scn_reactorb_scaffold_74415_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11730..12398
DNA (669bp) protein (223aa)
Putative exopolyphosphatase n=1 Tax=Clostridium difficile CD160 RepID=T3DP61_CLODI
Putative exopolyphosphatase {ECO:0000313|EMBL:EQF29333.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
ATP/GTP-binding protein
scn_reactorb_scaffold_74415_11
Peptostreptococcus stomatis, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12432..12647
DNA (216bp) protein (72aa)
4Fe-4S binding domain protein n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E2T2_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFM64804.1}; TaxID=596315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus stomatis DSM 17678.;"
4Fe-4S ferredoxin
scn_reactorb_scaffold_74415_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12663..13724
DNA (1062bp) protein (354aa)
2-ketoisovalerate ferredoxin oxidoreductase {ECO:0000313|EMBL:KGG79590.1}; EC=1.2.7.7 {ECO:0000313|EMBL:KGG79590.1};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Ketoisovalerate oxidoreductase subunit vorB n=1 Tax=Clostridium ultunense Esp RepID=M1YSM0_9CLOT
2-ketoisovalerate ferredoxin reductase
scn_reactorb_scaffold_74415_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13724..14470
DNA (747bp) protein (249aa)
Thiamine pyrophosphate protein domain protein TPP-binding n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TW10_ALKMQ
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate protein domain protein TPP-binding {ECO:0000313|EMBL:ABR50378.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
scn_reactorb_scaffold_74415_14
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14471..15013
DNA (543bp) protein (181aa)
putative subunit of oxidoreductase (EC:1.2.7.1)
Acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family protein n=2 Tax=Clostridium bifermentans RepID=T4VXP9_CLOBI
Acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family protein {ECO:0000313|EMBL:EQK48698.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
scn_reactorb_scaffold_74415_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15182..16195)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97551.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dockerin type 1
scn_reactorb_scaffold_74415_16
Coprobacillus sp. CAG:605, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16337..17212)
DNA (876bp) protein (292aa)
Polysaccharide deacetylase n=1 Tax=Coprobacillus sp. CAG:605 RepID=R5W164_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCZ89521.1}; TaxID=1262855 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:605.;"
polysaccharide deacetylase family protein
scn_reactorb_scaffold_74415_17
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17386..17781)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2J9C3_9CLOT
Zn-finger containing protein {ECO:0000313|EMBL:KJS21717.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
scn_reactorb_scaffold_74415_18
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18205..19185
DNA (981bp) protein (327aa)
Tryptophan--tRNA ligase {ECO:0000313|EMBL:KGK86472.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KGK86472.1};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase II n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F5Y4_CLOSG
scn_reactorb_scaffold_74415_19
unknown

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19340..20698
DNA (1359bp) protein (453aa)

This feature has no annotations

scn_reactorb_scaffold_74415_20
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20923..21468)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41206.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
scn_reactorb_scaffold_74415_21
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21489..22076)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AVJ7_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM92843.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ABC transporter ATP-binding protein/permease
scn_reactorb_scaffold_74415_22
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22154..23071)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3E8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM92843.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
ABC transporter ATP-binding protein/permease
scn_reactorb_scaffold_74415_23
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23257..23808)
DNA (552bp) protein (184aa)
Acetyltransferase, GNAT family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0K155_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EQB27783.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
GCN5-related N-acetyltransferase
scn_reactorb_scaffold_74415_24
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24055..25500)
DNA (1446bp) protein (482aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A5R3_DESDJ
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AFL99297.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
scn_reactorb_scaffold_74415_25
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25529..27208)
DNA (1680bp) protein (560aa)
Putative membrane protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZV7_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EGW36828.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
scn_reactorb_scaffold_74415_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27198..27422)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T257_CLOSG
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22488.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
putative transcriptional regulator
scn_reactorb_scaffold_74415_27
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27434..27886)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KAD3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL00143.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
scn_reactorb_scaffold_74415_28
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28387..29280
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bacillus infantis NRRL B-14911 RepID=U5LDY5_9BACI
Alpha/beta hydrolase {ECO:0000313|EMBL:ETT57726.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
hypothetical protein
scn_reactorb_scaffold_74415_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29277..29945
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030137D0
CAAX amino terminal protease family protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ACO83570.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
scn_reactorb_scaffold_74415_30
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30019..30876
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JFY8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY65576.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Displaying 30 items

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