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scn_reactorb_scaffold_54703

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_54703_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..158
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01152.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_54703_2
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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326..1831
DNA (1506bp) protein (502aa)
Stage II sporulation protein E {ECO:0000313|EMBL:KGK83956.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
serine phosphatase id=4239084 bin=GWC2_Clostridiales_40_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
stage II sporulation protein E
scn_reactorb_scaffold_54703_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1931..3331
DNA (1401bp) protein (467aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWW2_9CLOT
scn_reactorb_scaffold_54703_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3333..3872
DNA (540bp) protein (180aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:EOD01136.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EOD01136.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CR38_9CLOT
scn_reactorb_scaffold_54703_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3895..5730
DNA (1836bp) protein (612aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
ftsH3; ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFQ2_9CLOT
scn_reactorb_scaffold_54703_6
unknown

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6098..6562
DNA (465bp) protein (155aa)

This feature has no annotations

scn_reactorb_scaffold_54703_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6567..7910
DNA (1344bp) protein (448aa)
TrkH family potassium uptake protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6M7_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:EOR24967.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
TrkH family potassium uptake protein
scn_reactorb_scaffold_54703_8
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7929..8591
DNA (663bp) protein (221aa)
TrkA N-terminal domain protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MLL7_9FIRM
TrkA N-terminal domain protein {ECO:0000313|EMBL:CDF00848.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
TrkA-N
scn_reactorb_scaffold_54703_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8600..9301)
DNA (702bp) protein (234aa)
Two component transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6H4_9CLOT
Two component transcriptional regulator {ECO:0000313|EMBL:EOR24969.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
two component transcriptional regulator
scn_reactorb_scaffold_54703_10
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9304..10455)
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BHT9_9CLOT
integral membrane sensor signal transduction histidine kinase
scn_reactorb_scaffold_54703_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10733..11659
DNA (927bp) protein (309aa)
Response regulator receiver domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9R5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS11593.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
response regulator receiver modulated CheW protein
scn_reactorb_scaffold_54703_12
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11879..12901
DNA (1023bp) protein (341aa)
Fis family transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2M4_9CLOT
Fis family transcriptional regulator {ECO:0000313|EMBL:ETA79262.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
sigma-54 dependent trancsriptional regulator
Displaying 12 items

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