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scn_reactorb_scaffold_41755

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_41755_1
Jeotgalicoccus sp. 13MG44_air, Jeotgalicoccus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3..656)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DE66B9
Pyrimidine-specific ribonucleoside hydrolase RihB {ECO:0000313|EMBL:CEA03512.1}; TaxID=1461582 species="Bacteria; Firmicutes; Bacilli; Bacillales; Jeotgalicoccus.;" source="Jeotgalicoccus sp. 13MG44_air.;"
inosine-uridine preferring nucleoside hydrolase-domain-containing protein
scn_reactorb_scaffold_41755_2
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(844..1782)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D6026C
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:EIV99399.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
ABC transporter permease
scn_reactorb_scaffold_41755_3
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1784..2851)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030FC388
ABC transporter permease {ECO:0000313|EMBL:KGK88815.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
inner-membrane translocator
scn_reactorb_scaffold_41755_4
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2844..4391)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D29CA7
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGK88814.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
ABC transporter ATP-binding protein
scn_reactorb_scaffold_41755_5
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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comp(4536..5660)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030C6681
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CEP77640.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
ABC transporter substrate binding protein
scn_reactorb_scaffold_41755_6
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5838..7223)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000378F670
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EIV99394.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
crystallin
scn_reactorb_scaffold_41755_7
Parvimonas sp. oral taxon 393, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7225..7926)
DNA (702bp) protein (234aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=944565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 393 str. F0440.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PQN4_9FIRM
purine-nucleoside phosphorylase
scn_reactorb_scaffold_41755_8
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8179..9420)
DNA (1242bp) protein (414aa)
murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATW5_CLOA9
scn_reactorb_scaffold_41755_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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9788..10132
DNA (345bp) protein (115aa)
Transcriptional regulator, PadR family id=3761189 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein X
Tax=GWF2_Clostridiales_36_10_curated
scn_reactorb_scaffold_41755_10
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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10125..10799
DNA (675bp) protein (225aa)
Putative membrane protein id=3761191 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
scn_reactorb_scaffold_41755_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10799..11752
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YWZ9_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93487.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
scn_reactorb_scaffold_41755_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12500..13393)
DNA (894bp) protein (298aa)
dagK; diacylglycerol kinase DagK (EC:2.7.1.107)
Diacylglycerol kinase catalytic region n=1 Tax=Clostridium ultunense Esp RepID=M1Z2L2_9CLOT
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:CCQ97105.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_41755_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13495..14772)
DNA (1278bp) protein (426aa)
HDOD domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA21_9FIRM
HDOD domain protein {ECO:0000313|EMBL:EDS11699.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
diguanylate phosphodiesterase
scn_reactorb_scaffold_41755_14
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15035..16633)
DNA (1599bp) protein (533aa)
Putative sporulation-specific glycosylase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWZ5_CLOA9
sporulation-specific glycosylase
Putative sporulation-specific glycosylase {ECO:0000313|EMBL:AFS78333.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_41755_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16956..18035)
DNA (1080bp) protein (360aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6F3_CLOSW
sporulation integral membrane protein YtvI
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:ADL05363.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
scn_reactorb_scaffold_41755_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18135..20357)
DNA (2223bp) protein (741aa)
Putative Diguanylate cyclase domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7K5_9CLOT
Putative Diguanylate cyclase domain protein {ECO:0000313|EMBL:CDG00978.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
signaling protein
scn_reactorb_scaffold_41755_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20495..21130)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AK89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ72462.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
scn_reactorb_scaffold_41755_18
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21230..22306)
DNA (1077bp) protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. CAG:510 RepID=R6BW04_9CLOT
scn_reactorb_scaffold_41755_19
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(22399..23271)
DNA (873bp) protein (291aa)
Uncharacterized protein id=3609368 bin=GWF2_Clostridiales_36_10 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
scn_reactorb_scaffold_41755_20
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(23412..28040)
DNA (4629bp) protein (1543aa)
bprF; bacillopeptidase F (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z368_9CLOT
Bacillopeptidase F {ECO:0000313|EMBL:GAK07125.1}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
Displaying 20 items

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