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scn_reactorb_scaffold_7751

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_7751_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..169
DNA (168bp) protein (56aa)
SpoIID/LytB domain protein n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S728_CALKI
Uncharacterized protein {ECO:0000313|EMBL:KGG81522.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
SpoIID/LytB domain-containing protein
scn_reactorb_scaffold_7751_2
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

166..1206
DNA (1041bp) protein (347aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VKH1_9FIRM
scn_reactorb_scaffold_7751_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1277..2395
DNA (1119bp) protein (373aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
tgt; Queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CEE8_9CLOT
scn_reactorb_scaffold_7751_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2428..2811
DNA (384bp) protein (128aa)
Preprotein translocase, YajC subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGN8_ALKOO
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ABW19261.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_7751_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2847..3701)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0J1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98122.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
scn_reactorb_scaffold_7751_6
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3906..4205
DNA (300bp) protein (100aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XB77_OXAFO
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEO30453.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes OXCC13.;"
hypothetical protein
scn_reactorb_scaffold_7751_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4290..6068
DNA (1779bp) protein (593aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMA0_EUBLK
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADO36728.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
scn_reactorb_scaffold_7751_8
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6159..7046
DNA (888bp) protein (296aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W7R2_DESOD
DNA-binding domain-containing protein
Tax=BJP_IG2069_Clostridiales_42_11
scn_reactorb_scaffold_7751_9
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7323..8978
DNA (1656bp) protein (552aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FKL9_PAEMK
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:AEI46387.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
scn_reactorb_scaffold_7751_10
MPI_TA06_32_111, Bacteria

Not on your lists

9050..11242
DNA (2193bp) protein (731aa)
Tax=MPI_TA06_32_111
scn_reactorb_scaffold_7751_11
unknown

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11354..11593
DNA (240bp) protein (80aa)

This feature has no annotations

scn_reactorb_scaffold_7751_12
unknown

Not on your lists

comp(11604..11804)
DNA (201bp) protein (67aa)

This feature has no annotations

scn_reactorb_scaffold_7751_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12371..13621
DNA (1251bp) protein (417aa)
id=1934234 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scn_reactorb_scaffold_7751_14
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(13762..15135)
DNA (1374bp) protein (458aa)
pycB; pyruvate carboxylase subunit B (EC:6.4.1.1)
Conserved carboxylase domain protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GL24_9FUSO
Putative pyruvate carboxylase subunit B {ECO:0000313|EMBL:ERK68616.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
scn_reactorb_scaffold_7751_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15284..15919)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6S5_9FIRM
Uncharacterised ACR, YkgG family COG1556.
Tax=BJP_IG2102_Clostridiales_34_350
scn_reactorb_scaffold_7751_16
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16220..16645
DNA (426bp) protein (142aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQI8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:KDR96560.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
transcriptional regulator, AsnC family
scn_reactorb_scaffold_7751_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16771..17634)
DNA (864bp) protein (288aa)
Transporter n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B8C0_CLOBO
Membrane protein {ECO:0000313|EMBL:KEH98993.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
transporter
scn_reactorb_scaffold_7751_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17954..18547
DNA (594bp) protein (198aa)
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Clostridiales RepID=D4JJ27_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBK93624.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
scn_reactorb_scaffold_7751_19
unknown

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18531..19502
DNA (972bp) protein (324aa)

This feature has no annotations

scn_reactorb_scaffold_7751_20
unknown

Not on your lists

19635..20129
DNA (495bp) protein (165aa)

This feature has no annotations

scn_reactorb_scaffold_7751_21
unknown

Not on your lists

20368..20526
DNA (159bp) protein (53aa)

This feature has no annotations

scn_reactorb_scaffold_7751_22
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20480..21334
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RPW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA58500.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
glucosaminidase
scn_reactorb_scaffold_7751_23
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21479..22717
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus laterosporus GI-9 RepID=H0UBV8_BRELA
Putative uncharacterized protein {ECO:0000313|EMBL:CCF14952.1}; TaxID=1118154 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus GI-9.;"
hypothetical protein
scn_reactorb_scaffold_7751_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23179..23868
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99696.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_7751_25
Bacteroides sp. CAG:1060, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23935..24825)
DNA (891bp) protein (297aa)
membrane protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B588D8
Uncharacterized protein {ECO:0000313|EMBL:CCX55914.1}; TaxID=1262734 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1060.;"
PF10035 family protein
scn_reactorb_scaffold_7751_26
unknown

Not on your lists

25015..25128
DNA (114bp) protein (38aa)

This feature has no annotations

scn_reactorb_scaffold_7751_27
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

25173..26837
DNA (1665bp) protein (555aa)
FAD dependent oxidoreductase id=2112784 bin=GWD2_Clostridiales_32_59 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
hypothetical protein
Tax=GWD2_Clostridiales_32_19_curated
scn_reactorb_scaffold_7751_28
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26892..28136
DNA (1245bp) protein (415aa)
HI0933 family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHU7_ALKOO
Flavoprotein {ECO:0000313|EMBL:KJF27558.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
scn_reactorb_scaffold_7751_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28163..30928
DNA (2766bp) protein (922aa)
Protein translocase subunit SecA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CNW9_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
secA; preprotein translocase subunit SecA
scn_reactorb_scaffold_7751_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31101..32189
DNA (1089bp) protein (363aa)
Peptide chain release factor 2 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUT4_9CLOT
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
prfB; peptide chain release factor PrfB
Displaying items 1-30 of 42 in total

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