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scn_reactorb_scaffold_28769

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_28769_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

2..562
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=3419087 bin=GWF2_Clostridiales_38_85 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_28769_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(653..1372)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27474.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
scn_reactorb_scaffold_28769_3
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

1564..2793
DNA (1230bp) protein (410aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2RBY6_9FUSO
GTP-binding protein
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:ERK66039.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
scn_reactorb_scaffold_28769_4
unknown

Not on your lists

3046..3414
DNA (369bp) protein (123aa)

This feature has no annotations

scn_reactorb_scaffold_28769_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3586..4638
DNA (1053bp) protein (351aa)
ApbE family lipoprotein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8HZX5_CLOCE
Membrane-associated lipoprotein involved in thiamine biosynthesis {ECO:0000313|EMBL:EXG84206.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ApbE family lipoprotein
scn_reactorb_scaffold_28769_6
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4666..5325
DNA (660bp) protein (220aa)
CAAX protease n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y6X9_CLOSH
CAAX protease
Uncharacterized protein {ECO:0000313|EMBL:AGC68919.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
scn_reactorb_scaffold_28769_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5462..6676
DNA (1215bp) protein (405aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Clostridium botulinum F RepID=MURC_CLOBL
scn_reactorb_scaffold_28769_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6726..7184
DNA (459bp) protein (153aa)
ATPase YjeE, predicted to have essential role in cell wall biosynthesis n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDP3_9CLOT
ATPase YjeE, predicted to have essential role in cell wall biosynthesis {ECO:0000313|EMBL:EOD00405.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
ATP/GTP hydrolase
scn_reactorb_scaffold_28769_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7187..7945
DNA (759bp) protein (253aa)
Putative molecular chaperone n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CNY2_9CLOT
Putative molecular chaperone {ECO:0000313|EMBL:EOD00406.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
O-sialoglycoprotein endopeptidase
scn_reactorb_scaffold_28769_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8001..8450
DNA (450bp) protein (150aa)
(30S ribosomal protein S18P)-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-S18p-alanine acetyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUU4_9CLOT
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:EOD00407.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_28769_11
Alkalibacterium sp. AK22, Alkalibacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8431..9318
DNA (888bp) protein (296aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EXJ22951.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EXJ22951.1};; TaxID=1229520 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Alkalibacterium.;" source="Alkalibacterium sp. AK22.;"
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI00030443E7
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
scn_reactorb_scaffold_28769_12
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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9367..10392
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
gcp; DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z4N8_9FIRM
scn_reactorb_scaffold_28769_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10640..12553)
DNA (1914bp) protein (638aa)
ATPase component of ABC transporter n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CD08_9CLOT
Thiamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGG81236.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
ABC transporter ATP-binding protein
scn_reactorb_scaffold_28769_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12774..13982
DNA (1209bp) protein (403aa)
Acetyltransferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UTT5_CLOBO
Acetyltransferase domain protein {ECO:0000313|EMBL:AIY80508.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
acetyltransferase
scn_reactorb_scaffold_28769_15
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14324..16003
DNA (1680bp) protein (560aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
glnS; Glutamine-tRNA ligase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Clostridium sp. CAG:632 RepID=R5K342_9CLOT
scn_reactorb_scaffold_28769_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16032..17216
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYC2_CLOA9
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGG79913.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_28769_17
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17218..18630
DNA (1413bp) protein (471aa)
PAS modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYD9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA71114.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
scn_reactorb_scaffold_28769_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18895..19473
DNA (579bp) protein (193aa)
electron transporter RnfC, partial n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B719E8
Respiratory-chain NADH dehydrogenase 51 Kd subunit {ECO:0000313|EMBL:KIE44484.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
scn_reactorb_scaffold_28769_19
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19526..20014
DNA (489bp) protein (163aa)
electron transporter RnfC n=1 Tax=Clostridium sp. JC122 RepID=UPI00028900A3
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:AKA71102.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
scn_reactorb_scaffold_28769_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20034..22169
DNA (2136bp) protein (712aa)
D-proline reductase proprotein prdA {ECO:0000313|EMBL:KIE44794.1}; EC=1.21.4.1 {ECO:0000313|EMBL:KIE44794.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
prdA_1; D-proline reductase, PrdA proprotein (EC:1.21.4.1)
D-proline reductase, 45 kDa subunit / D-proline reductase, 23 kDa subunit n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RU09_9CLOT
scn_reactorb_scaffold_28769_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22172..22420
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZT49_CLOB0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO87037.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
scn_reactorb_scaffold_28769_22
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22422..22859
DNA (438bp) protein (146aa)
proline reductase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288DC3E
D-proline reductase (dithiol)
D-proline reductase (Dithiol) {ECO:0000313|EMBL:AKA71099.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
scn_reactorb_scaffold_28769_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22995..23132
DNA (138bp) protein (46aa)
prdB; D-proline reductase, PrdB subunit (EC:1.21.4.1)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA81405.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
scn_reactorb_scaffold_28769_24
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23159..24172
DNA (1014bp) protein (338aa)
Proline racemase {ECO:0000313|EMBL:CDF58812.1}; EC=5.1.1.4 {ECO:0000313|EMBL:CDF58812.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Proline racemase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RRI6_9CLOT
prdF; Proline racemase A precursor (TcPRACA) (TcPA45-A) (rTcPA45)
scn_reactorb_scaffold_28769_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24287..25534
DNA (1248bp) protein (416aa)
parathion hydrolase (EC:3.1.8.1)
UPI0002F1B63D related cluster n=1 Tax=unknown RepID=UPI0002F1B63D
Uncharacterized protein {ECO:0000313|EMBL:EDP17292.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
scn_reactorb_scaffold_28769_26
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25689..25961
DNA (273bp) protein (91aa)
Prevent-host-death family protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AZE6_SYNWW
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABI67908.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
scn_reactorb_scaffold_28769_27
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25948..26262
DNA (315bp) protein (105aa)
plasmid stabilization protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003701200
Plasmid stabilization system protein {ECO:0000313|EMBL:EHQ90453.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
RelE/StbE family addiction module toxin
scn_reactorb_scaffold_28769_28
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26710..28002
DNA (1293bp) protein (431aa)
UPF0061 protein DesyoDRAFT_2710 n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y484_9FIRM
UPF0061 protein DesyoDRAFT_2710 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
scn_reactorb_scaffold_28769_29
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28148..28459
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMP2_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37105.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
scn_reactorb_scaffold_28769_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28465..28671
DNA (207bp) protein (69aa)
XRE family transcriptional regulator n=1 Tax=[Clostridium] glycolicum RepID=UPI000376CFB3
Uncharacterized protein {ECO:0000313|EMBL:EGN31946.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
transcriptional regulator
Displaying items 1-30 of 36 in total

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