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scn_reactorb_scaffold_109072

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_109072_1
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..563
DNA (561bp) protein (187aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWY8_CLOA9
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_109072_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

950..1909
DNA (960bp) protein (320aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG68_9CLOT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEG29525.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
radical SAM domain protein
scn_reactorb_scaffold_109072_3
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1955..3367
DNA (1413bp) protein (471aa)
Biotin and thiamin synthesis associated n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I070_CLOCE
thiH; thiamine biosynthesis protein ThiH
Biotin and thiamin synthesis associated {ECO:0000313|EMBL:ACL77396.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
scn_reactorb_scaffold_109072_4
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3382..4572
DNA (1191bp) protein (397aa)
Small GTP-binding protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I069_CLOCE
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:ACL77395.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
scn_reactorb_scaffold_109072_5
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

comp(4617..6104)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AAH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX39708.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
scn_reactorb_scaffold_109072_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6174..7631)
DNA (1458bp) protein (486aa)
Periplasmic [Fe] hydrogenase {ECO:0000313|EMBL:EOD01398.1}; EC=1.12.7.2 {ECO:0000313|EMBL:EOD01398.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Periplasmic [Fe] hydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AW48_9CLOT
hydrogenase large subunit domain-containing protein
scn_reactorb_scaffold_109072_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7714..8883)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AXL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01397.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Stage II sporulation E family protein
scn_reactorb_scaffold_109072_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8890..10605)
DNA (1716bp) protein (572aa)
Periplasmic [Fe] hydrogenase {ECO:0000313|EMBL:EOD01396.1}; EC=1.12.7.2 {ECO:0000313|EMBL:EOD01396.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Periplasmic [Fe] hydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRU7_9CLOT
hydrogenase large subunit domain protein
scn_reactorb_scaffold_109072_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10602..10850)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KX64_CLOB6
hypothetical protein
NADH dehydrogenase {ECO:0000313|EMBL:KIN82181.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
scn_reactorb_scaffold_109072_10
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11160..11981)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PM97_9FIRM
PF05853 family protein {ECO:0000313|EMBL:ETJ99859.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
hypothetical protein
scn_reactorb_scaffold_109072_11
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12033..12323)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C997_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61927.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
scn_reactorb_scaffold_109072_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(12437..13750)
DNA (1314bp) protein (438aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7Z2_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CCZ34889.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
scn_reactorb_scaffold_109072_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13894..17442)
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
nifJ1; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUU4_9CLOT
scn_reactorb_scaffold_109072_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17778..18695)
DNA (918bp) protein (306aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
HPr kinase/phosphorylase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CLR3_THEYO
HprK; HPr kinase/phosphorylase
scn_reactorb_scaffold_109072_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18985..19878
DNA (894bp) protein (298aa)
glutaminase (EC:3.5.1.2)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Glutaminase 2 n=10 Tax=Clostridium perfringens RepID=GLSA2_CLOPE
scn_reactorb_scaffold_109072_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19989..20270
DNA (282bp) protein (94aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1X6_CLOB8
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ABR36606.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
scn_reactorb_scaffold_109072_17
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20359..20868
DNA (510bp) protein (170aa)
Putative flavoredoxin n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B437_CLOA9
flavoredoxin
Putative flavoredoxin {ECO:0000313|EMBL:AFS79326.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_109072_18
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20948..21379)
DNA (432bp) protein (144aa)
Acyl-CoA hydrolase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLN1_ALKOO
acyl-CoA hydrolase
Tax=BJP_IG2103_Clostridiales_50_15
scn_reactorb_scaffold_109072_19
unknown

Not on your lists

comp(21370..21525)
DNA (156bp) protein (52aa)

This feature has no annotations

scn_reactorb_scaffold_109072_20
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21555..22466)
DNA (912bp) protein (304aa)
Protein-export membrane protein SecF n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SZM3_SYNGF
protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; Flags: Precursor;; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
scn_reactorb_scaffold_109072_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22463..23737)
DNA (1275bp) protein (425aa)
Protein-export membrane protein SecD n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JSC5_CELLD
protein-export membrane protein SecD
Protein-export membrane protein SecD {ECO:0000313|EMBL:ADZ85163.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
scn_reactorb_scaffold_109072_22
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24089..24472)
DNA (384bp) protein (128aa)
Beta-alanyl-CoA:ammonia lyase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JF49_9BACT
3-aminobutyryl-CoA ammonia lyase {ECO:0000313|EMBL:KGN83104.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein
scn_reactorb_scaffold_109072_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24673..25827)
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CE67_9CLOT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
dnaJ; chaperone protein DnaJ
scn_reactorb_scaffold_109072_24
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25973..27814)
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=1 Tax=Clostridium ultunense Esp RepID=M1ZG54_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
dnaK; chaperone protein DnaK
scn_reactorb_scaffold_109072_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27857..28438)
DNA (582bp) protein (194aa)
Protein GrpE n=1 Tax=Clostridium ultunense Esp RepID=M1Z3E9_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
protein grpE
scn_reactorb_scaffold_109072_26
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28479..29549)
DNA (1071bp) protein (357aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATX3_9CLOT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
heat-inducible transcription repressor HrcA
scn_reactorb_scaffold_109072_27
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(29936..30799)
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family id=2084443 bin=GWB2_Clostridiales_37_7 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
DNA-binding domain-containing protein
Tax=GWB2_Clostridiales_37_7_curated
scn_reactorb_scaffold_109072_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31006..31245)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C630_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73561.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
scn_reactorb_scaffold_109072_29
unknown

Not on your lists

comp(31776..32984)
DNA (1209bp) protein (403aa)

This feature has no annotations

scn_reactorb_scaffold_109072_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33215..35047)
DNA (1833bp) protein (611aa)
GTP-binding protein TypA/BipA n=1 Tax=Clostridium difficile CD160 RepID=T3DA52_CLODI
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EQF24373.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
GTP-binding protein
Displaying items 1-30 of 35 in total

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