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scn_reactorb_scaffold_19073

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_19073_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1112
DNA (1110bp) protein (370aa)
Histidine kinase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R089_9CLOT
Histidine kinase {ECO:0000313|EMBL:EPR10541.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
signal transduction histidine kinase regulating citrate/malate metabolism
scn_reactorb_scaffold_19073_2
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1186..1458)
DNA (273bp) protein (91aa)
ATP synthase epsilon chain n=1 Tax=Clostridium ultunense Esp RepID=M1ZAI8_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
H+transporting two-sector ATPase delta/subunit epsilon
scn_reactorb_scaffold_19073_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1460..2857)
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
atpD; F0F1 ATPase subunit beta AtpD (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridium ultunense Esp RepID=M1ZA12_9CLOT
scn_reactorb_scaffold_19073_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2943..3809)
DNA (867bp) protein (289aa)
atpG; F0F1 ATPase subunit gamma AtpG (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium ultunense Esp RepID=M1YVY9_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_19073_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3819..5321)
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
atpA; F0F1 ATPase subunit alpha AtpA (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium ultunense Esp RepID=M1Z9B1_9CLOT
scn_reactorb_scaffold_19073_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5323..5598)
DNA (276bp) protein (92aa)
ATP synthase subunit delta n=1 Tax=Clostridium ultunense Esp RepID=M1ZK21_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
ATP synthase F1 subunit delta
scn_reactorb_scaffold_19073_7
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5592..6059)
DNA (468bp) protein (156aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium ultunense Esp RepID=M1ZAK0_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_19073_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6230..6499)
DNA (270bp) protein (90aa)
atpE; F0F1 ATPase subunit C AtpE (EC:3.6.3.14)
ATP synthase subunit c n=1 Tax=Clostridium ultunense Esp RepID=M1ZA22_9CLOT
ATP synthase subunit c {ECO:0000313|EMBL:CCQ94694.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_19073_9
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6525..7199)
DNA (675bp) protein (225aa)
atpB; F0F1 ATPase subunit A AtpB (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AQQ0_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
scn_reactorb_scaffold_19073_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7362..7724)
DNA (363bp) protein (121aa)
atpI; F0 ATP synthase subunit I (EC:3.6.3.14)
Putative ATP synthase protein I n=1 Tax=Clostridium ultunense Esp RepID=M1Z9B4_9CLOT
Putative ATP synthase protein I {ECO:0000313|EMBL:CCQ94696.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_19073_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7736..7954)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZK22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ94697.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
scn_reactorb_scaffold_19073_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8327..12073
DNA (3747bp) protein (1249aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EOD00163.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EOD00163.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASM6_9CLOT
purQ; bifunctional enzyme phosphoribosylformylglycinamidine (FGAM) synthase (synthetase domain/glutamine amidotransferase domain)
scn_reactorb_scaffold_19073_13
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12102..12590
DNA (489bp) protein (163aa)
purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VRW2_CLOSH
scn_reactorb_scaffold_19073_14
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12646..12981
DNA (336bp) protein (112aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKU5_EUBLK
hypothetical protein
scn_reactorb_scaffold_19073_15
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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12978..13346
DNA (369bp) protein (123aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAZ7_9FIRM
scn_reactorb_scaffold_19073_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13398..14798
DNA (1401bp) protein (467aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CTZ4_9CLOT
scn_reactorb_scaffold_19073_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14819..15859
DNA (1041bp) protein (347aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASL9_9CLOT
phosphoribosylaminoimidazole synthetase
scn_reactorb_scaffold_19073_18
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15847..16473
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AU12_9CLOT
hypothetical protein
scn_reactorb_scaffold_19073_19
unknown

Not on your lists

comp(16504..17697)
DNA (1194bp) protein (398aa)

This feature has no annotations

scn_reactorb_scaffold_19073_20
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17699..18841)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D506_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79241.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
scn_reactorb_scaffold_19073_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18910..19854)
DNA (945bp) protein (315aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. CAG:58 RepID=R6RKN1_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDC49453.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
methanol dehydrogenase regulatory protein
scn_reactorb_scaffold_19073_22
unknown

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20053..22089
DNA (2037bp) protein (679aa)

This feature has no annotations

scn_reactorb_scaffold_19073_23
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..22988)
DNA (828bp) protein (276aa)
Lipoprotein n=2 Tax=Bilophila RepID=E5Y5G4_BILWA
metal ABC transporter substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
scn_reactorb_scaffold_19073_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23254..24507
DNA (1254bp) protein (418aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCY4_9CLOT
scn_reactorb_scaffold_19073_25
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24659..25156
DNA (498bp) protein (166aa)
SEC-C motif-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B033_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KDR94900.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
SEC-C motif-containing protein
scn_reactorb_scaffold_19073_26
unknown

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25221..25532
DNA (312bp) protein (104aa)

This feature has no annotations

scn_reactorb_scaffold_19073_27
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25643..26740)
DNA (1098bp) protein (366aa)
ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.2)
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVJ4_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
Displaying 27 items

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