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scn_reactorb_scaffold_21233

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_21233_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

440..1465
DNA (1026bp) protein (342aa)
Peptidase M23 n=1 Tax=Clostridium termitidis CT1112 RepID=S0FP73_9CLOT
Peptidase M23 {ECO:0000313|EMBL:EMS70924.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
metalloendopeptidase-like membrane protein
scn_reactorb_scaffold_21233_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1641..2984
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Y9_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG31744.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
MATE efflux family protein
scn_reactorb_scaffold_21233_3
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

3120..3860
DNA (741bp) protein (247aa)
Selenophosphate synthase-like enzyme n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J520_MARPK
selenophosphate synthase-like enzyme
Selenophosphate synthase-like enzyme {ECO:0000313|EMBL:AEX86037.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
scn_reactorb_scaffold_21233_4
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

4058..4492
DNA (435bp) protein (145aa)
UPF0178 protein Ilyop_2552 n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HBY5_ILYPC
hypothetical protein
UPF0178 protein Ilyop_2552 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain DSM 2926 / CuHBu1).;"
scn_reactorb_scaffold_21233_5
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

Not on your lists

4541..5443
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4B257_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESP00347.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lottia gigantea (Giant owl limpet).;"
phzM; phenazine-specific methyltransferase
scn_reactorb_scaffold_21233_6
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(5762..6262)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EQ82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA92092.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
PilT domain-containing protein
scn_reactorb_scaffold_21233_7
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(6255..7313)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E671_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA92091.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
scn_reactorb_scaffold_21233_8
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7499..8383)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JD05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32109.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
scn_reactorb_scaffold_21233_9
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8497..9717)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DCAFA9
Uncharacterized protein {ECO:0000313|EMBL:EYE88523.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
MFS transporter
scn_reactorb_scaffold_21233_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10169..11896
DNA (1728bp) protein (576aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8N0_CLOSW
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADL05759.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
scn_reactorb_scaffold_21233_11
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11991..12335)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI000381B072
Uncharacterized protein {ECO:0000313|EMBL:KGK86005.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
scn_reactorb_scaffold_21233_12
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12337..13620)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPX9_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41878.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_21233_13
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13713..14399)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F4Q0_DESDL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA68814.1}; Flags: Precursor;; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
scn_reactorb_scaffold_21233_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14939..17596
DNA (2658bp) protein (886aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Valine--tRNA ligase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIE2_ALKOO
valyl-tRNA synthetase
scn_reactorb_scaffold_21233_15
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17734..19080
DNA (1347bp) protein (449aa)
Transposase family protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IGU6_THETR
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AGB18750.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
scn_reactorb_scaffold_21233_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19403..21175
DNA (1773bp) protein (591aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8N0_CLOSW
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADL05759.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
scn_reactorb_scaffold_21233_17
unknown

Not on your lists

21399..21590
DNA (192bp) protein (64aa)

This feature has no annotations

scn_reactorb_scaffold_21233_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21675..22280
DNA (606bp) protein (202aa)
B3/4 domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGB5_ALKOO
Clostridium botulinum B2 450 B2_450_contig007, whole genome shotgun sequence {ECO:0000313|EMBL:KIS22832.1}; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B2 450.;"
B3/4 domain-containing protein
scn_reactorb_scaffold_21233_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22658..23077
DNA (420bp) protein (140aa)
Glyoxalase n=2 Tax=Clostridium bolteae RepID=R0BK75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16678.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
glyoxalase/bleomycin resistance protein/dioxygenase
scn_reactorb_scaffold_21233_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23238..23690
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3D9C5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23135.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
uncharacterised protein
scn_reactorb_scaffold_21233_21
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23751..24698
DNA (948bp) protein (316aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNV7_CLOC7
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADL49978.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Displaying 21 items

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