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scn_reactorb_scaffold_39885

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_39885_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1..1473
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0004 RepID=L2JIP4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELA79598.1}; TaxID=1138892 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0004.;"
Type I restriction modification DNA specificity domain
scn_reactorb_scaffold_39885_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1466..1969)
DNA (504bp) protein (168aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Y9_9CLOT
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CDD74143.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
scn_reactorb_scaffold_39885_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

2099..2911
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14532.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
integrase
scn_reactorb_scaffold_39885_4
Treponema putidum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2947..4578)
DNA (1632bp) protein (544aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDP8_9FIRM
type I restriction-modification system
Type I restriction-modification system {ECO:0000313|EMBL:AIN93894.1}; TaxID=221027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema putidum.;"
scn_reactorb_scaffold_39885_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4575..6005)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L2X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS52858.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
type I restriction endonuclease subunit M
scn_reactorb_scaffold_39885_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6010..8790)
DNA (2781bp) protein (927aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9LAU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS52857.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
DEAD/DEAH box helicase
scn_reactorb_scaffold_39885_7
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9406..9873)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NSF1_TRES6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB14587.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
scn_reactorb_scaffold_39885_8
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10164..10961)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24378.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
methyltransferase type 11
scn_reactorb_scaffold_39885_9
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11053..11706)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I500_CLOCE
von Willebrand factor, type A {ECO:0000313|EMBL:CFW98027.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
hypothetical protein
scn_reactorb_scaffold_39885_10
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11891..12928)
DNA (1038bp) protein (346aa)
Appr-1-p processing domain protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I4Z8_CLOCE
Macro domain {ECO:0000313|EMBL:CFW98046.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
Appr-1-p processing protein
scn_reactorb_scaffold_39885_11
Eremococcus coleocola, Eremococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13329..14447)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Eremococcus coleocola ACS-139-V-Col8 RepID=E4KRJ2_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EFR30428.1}; TaxID=908337 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Eremococcus.;" source="Eremococcus coleocola ACS-139-V-Col8.;"
hypothetical protein
scn_reactorb_scaffold_39885_12
Prevotella bergensis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14434..14727)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PVF9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFA44620.1}; TaxID=585502 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bergensis DSM 17361.;"
scn_reactorb_scaffold_39885_13
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14831..15217)
DNA (387bp) protein (129aa)
Toxin-antitoxin system, toxin component, Fic family n=2 Tax=Oscillibacter RepID=U2QKF6_9FIRM
Toxin Fic {ECO:0000313|EMBL:KJF25508.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
virulence protein
scn_reactorb_scaffold_39885_14
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15204..15839)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AEQ7_9FIRM
Toxin Fic {ECO:0000313|EMBL:KJF25508.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
Virulence protein
scn_reactorb_scaffold_39885_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15870..17438)
DNA (1569bp) protein (523aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
RNA methyltransferase, TrmA family n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CW35_9CLOT
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:EOD00849.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_39885_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17621..18517)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CR91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA79273.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
radical SAM protein
scn_reactorb_scaffold_39885_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18579..19436)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CZ28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01834.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scn_reactorb_scaffold_39885_18
unknown

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comp(19503..19631)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 18 items

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