ggKbase home page

scn_reactorb_scaffold_26010

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_26010_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
OmpR family two-component response regulator n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KW55_OSCVS
OmpR family two-component response regulator
OmpR family two-component response regulator {ECO:0000313|EMBL:BAK98277.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
scn_reactorb_scaffold_26010_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

251..1750
DNA (1500bp) protein (500aa)
putative two-component histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative two-component histidine kinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KW54_OSCVS
scn_reactorb_scaffold_26010_3
unknown

Not on your lists

comp(1747..1881)
DNA (135bp) protein (45aa)

This feature has no annotations

scn_reactorb_scaffold_26010_4
unknown

Not on your lists

comp(1988..3430)
DNA (1443bp) protein (481aa)

This feature has no annotations

scn_reactorb_scaffold_26010_5
unknown

Not on your lists

comp(3585..4997)
DNA (1413bp) protein (471aa)

This feature has no annotations

scn_reactorb_scaffold_26010_6
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5303..7951)
DNA (2649bp) protein (883aa)
Pyruvate n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GM68_EUBLK
Pyruvate {ECO:0000313|EMBL:ADO36696.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
pyruvate
scn_reactorb_scaffold_26010_7
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8360..9127)
DNA (768bp) protein (256aa)
thyX; thymidylate synthase flavin-dependend (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Thymidylate synthase ThyX n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LD46_ACEWD
scn_reactorb_scaffold_26010_8
unknown

Not on your lists

comp(9347..9559)
DNA (213bp) protein (71aa)
hypothetical protein
scn_reactorb_scaffold_26010_9
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9704..9997)
DNA (294bp) protein (98aa)
Putative RNA-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0C7_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM56461.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
scn_reactorb_scaffold_26010_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10017..11291)
DNA (1275bp) protein (425aa)
GTPase Obg n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AT40_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
obg; GTP-binding protein Obg
scn_reactorb_scaffold_26010_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11436..11729)
DNA (294bp) protein (98aa)
50S ribosomal protein L27 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARN9_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
LSU ribosomal protein L27P
scn_reactorb_scaffold_26010_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11733..12062)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYW7_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KGG80191.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_26010_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12094..12405)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBX9_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
50S ribosomal protein L21
scn_reactorb_scaffold_26010_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12639..13796)
DNA (1158bp) protein (386aa)
Cell division protein FtsW n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC63_9CLOT
Rod shape-determining protein RodA {ECO:0000313|EMBL:KGG80325.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
rodA1; rod shape-determining protein RodA
scn_reactorb_scaffold_26010_15
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14197..14865
DNA (669bp) protein (223aa)
Patatin n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LMD6_9SPIR
patatin-like phospholipase
Patatin-like phospholipase {ECO:0000313|EMBL:CDM68178.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Displaying 15 items

View Taxonomy