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scn_reactorb_scaffold_8801_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1054..2418)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPR6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 452.0
  • Bit_score: 539
  • Evalue 2.60e-150
MATE efflux family protein {ECO:0000313|EMBL:CDA78688.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 452.0
  • Bit_score: 539
  • Evalue 3.70e-150
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 452.0
  • Bit_score: 383
  • Evalue 5.20e-104

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Taxonomy

Clostridium sp. CAG:242 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1365
ATGCAAATGGAAAACAAAATTAAACTAGATAAAACCTTTTATAAGCCCATGTTAGTTATTGCCATACCTGTCGTTATGCAAAACCTAATGAATATAGGTTTAAATATGCTTGACTCTATAATGGTAGGGCAGCTAGGAGTTAATCCTTTAGCCGGAGTTGGTATCGCAAATAGAGTATTTTTTATTTTTTCAATGGTATGCTTTGGAATATACAGCGGCTCATCAATATTTATTTCCCAATACTGGGGCGTTAAGGATACTAAAAACATTAAAAAGATTTTTGGAATGAATTTATTTTTGGGGTTTGTATTATCCTTAGCGGTCACAATTATTGCATTTGTATTTGCAAGGCAGATAGTTTCAATATTCAATAAGGATGCAGAAGTAGTCAGAGACGGGGTAATATATTTGAGGTACGTGTCAATTTCCTATATATTTACAGCTCTTTCAACAGCAGTAAGCTTTAGTTCACGACCTATACATAAATTAACTATGCCAACTGTTGCTAACCTCATAGCCATTCTCACAAATGCTCTCTTAAATTATTTGTTAATTTTCGGGGTTGCAGGATTTCCAAAGCTTGGAGTTGCTGGAGCGGCAATAGCTACTGTAATAGCAAGAATAATAGAGTTTATTATATTGTTTGCTTATATATATAAGTCTGATAATCATCCTCTGGCCGGTACGATAAAACAGTATATGTCTTGGGATTATAAGATGTTTAAGGATACCTTAAAAACATCCTTTCCCGTAATAGTTACTGAATCTTCATGGTCAATAGGAAACACCGTTTACTACATAGCTTACGGTATTATGGGACCTTCTGCTATAGCAGTAGTTCAGGTCGCATATATAATAAACGATTTATTTCAGTCAATGTTTTTTGGACTTGGAAATGCGTGTGCGGTTATGCTTGGAAATGAGATAGGACAAAATAATATTAAAAAAGCGACTGATTACAGTAAAGTATTTTTGAAATTGTGTTTAATTTTAAATGTCATAATTACCGTTGCTTTATATTTGTCAAGACATGCTGTTGCAAATATGTATAACTTTGATGCTGAAACCAAGGTTTTGTTAGAAAAAGCATTAGTAGTGTTTGCAATATATATGACTCCTAAGATGCTGACATATCTGTTTATCTGCGGTATACTGCGCGCCGGCGGCGATACAAAATTCTGTATGTATTTAGATGTAAGTGCTGTTTGGTTAATTGGGATACCTTTGGCATTCTTTTCAGTTATAGTTTTAAAGCTTCCTCTGCAATATGTTCTTGCACTTGTATTCAGCGAAGAGGTAGTTAAGCTTATAATAGTCTCAAAAAGATATAAGAGTGAAAAATGGATAAATAATCTTATAAATTGA
PROTEIN sequence
Length: 455
MQMENKIKLDKTFYKPMLVIAIPVVMQNLMNIGLNMLDSIMVGQLGVNPLAGVGIANRVFFIFSMVCFGIYSGSSIFISQYWGVKDTKNIKKIFGMNLFLGFVLSLAVTIIAFVFARQIVSIFNKDAEVVRDGVIYLRYVSISYIFTALSTAVSFSSRPIHKLTMPTVANLIAILTNALLNYLLIFGVAGFPKLGVAGAAIATVIARIIEFIILFAYIYKSDNHPLAGTIKQYMSWDYKMFKDTLKTSFPVIVTESSWSIGNTVYYIAYGIMGPSAIAVVQVAYIINDLFQSMFFGLGNACAVMLGNEIGQNNIKKATDYSKVFLKLCLILNVIITVALYLSRHAVANMYNFDAETKVLLEKALVVFAIYMTPKMLTYLFICGILRAGGDTKFCMYLDVSAVWLIGIPLAFFSVIVLKLPLQYVLALVFSEEVVKLIIVSKRYKSEKWINNLIN*