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scn_reactorb_scaffold_8801

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_8801_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..569
DNA (567bp) protein (189aa)
Glycerophosphoryl diester phosphodiesterase family protein n=2 Tax=Clostridium botulinum RepID=C3L3D4_CLOB6
glycerophosphoryl diester phosphodiesterase family protein
Uncharacterized protein {ECO:0000313|EMBL:KIN83083.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
scn_reactorb_scaffold_8801_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(628..1032)
DNA (405bp) protein (135aa)
Acetyltransferase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVC6_CLOSO
Acetyltransferase {ECO:0000313|EMBL:CEP90526.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
GNAT family acetyltransferase
scn_reactorb_scaffold_8801_3
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1054..2418)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPR6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA78688.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
MATE efflux family protein
scn_reactorb_scaffold_8801_4
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2733..4151
DNA (1419bp) protein (473aa)
Conserved protein n=2 Tax=Clostridium tetani RepID=Q893L7_CLOTE
peptidase
Conserved protein {ECO:0000313|EMBL:AAO36325.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
scn_reactorb_scaffold_8801_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4615..5241
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2DGL8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92693.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
protein of unknown function DUF886
scn_reactorb_scaffold_8801_6
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5305..6234
DNA (930bp) protein (310aa)
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Aspartate carbamoyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYE1_CLOA9
scn_reactorb_scaffold_8801_7
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6228..6656
DNA (429bp) protein (143aa)
Aspartate transcarbamylase regulatory subunit n=1 Tax=Clostridium sp. CAG:230 RepID=R6DHW8_9CLOT
Aspartate transcarbamylase regulatory subunit {ECO:0000313|EMBL:CDA88128.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
pyrI; aspartate carbamoyltransferase regulatory subunit
scn_reactorb_scaffold_8801_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6601..7968
DNA (1368bp) protein (456aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G649_9CLOT
scn_reactorb_scaffold_8801_9
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8124..8963
DNA (840bp) protein (280aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899ACE
scn_reactorb_scaffold_8801_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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8992..9729
DNA (738bp) protein (246aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EBC1_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
pyrK; dihydroorotate dehydrogenase electron transfer subunit
scn_reactorb_scaffold_8801_11
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9823..10722
DNA (900bp) protein (300aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q2N1_CLONN
dihydroorotate dehydrogenase 1B
scn_reactorb_scaffold_8801_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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10813..11481
DNA (669bp) protein (223aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZB8_9FIRM
scn_reactorb_scaffold_8801_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11502..11915
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20818.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
scn_reactorb_scaffold_8801_14
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12021..12548)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5Z2_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG61096.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
scn_reactorb_scaffold_8801_15
unknown

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comp(12715..12945)
DNA (231bp) protein (77aa)

This feature has no annotations

scn_reactorb_scaffold_8801_16
unknown

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comp(12968..13468)
DNA (501bp) protein (167aa)

This feature has no annotations

scn_reactorb_scaffold_8801_17
Clostridium sp. CAG:793, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13787..14674
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5NDZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ00194.1}; TaxID=1262840 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:793.;"
polysaccharide deacetylase
scn_reactorb_scaffold_8801_18
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14741..15370)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MZB8_9CLOT
LuxR family transcriptional regulator {ECO:0000313|EMBL:KEZ85042.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
two component transcriptional regulator
scn_reactorb_scaffold_8801_19
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15422..16492)
DNA (1071bp) protein (357aa)
Two-component system NarL family sensor histidine kinase DesK protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2DS42_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85041.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
two-component sensor histidine kinase
scn_reactorb_scaffold_8801_20
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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16747..17424
DNA (678bp) protein (226aa)
Transcriptional regulator, AraC family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUP2_SYNGF
DNA binding HTH domain, AraC-type {ECO:0000313|EMBL:CFX18029.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
AraC family transcriptional regulator
scn_reactorb_scaffold_8801_21
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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17568..18239
DNA (672bp) protein (224aa)
Transcriptional regulator, AraC family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUP2_SYNGF
DNA binding HTH domain, AraC-type {ECO:0000313|EMBL:CFX18029.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
AraC family transcriptional regulator
scn_reactorb_scaffold_8801_22
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18394..18885
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUP3_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY55536.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
scn_reactorb_scaffold_8801_23
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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19083..19928
DNA (846bp) protein (282aa)
Tax=BJP_IG2102_Clostridiales_34_350
Displaying 23 items

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