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scn_reactorb_scaffold_8801_20

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 16747..17424

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUP2_SYNGF similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 225.0
  • Bit_score: 228
  • Evalue 4.90e-57
DNA binding HTH domain, AraC-type {ECO:0000313|EMBL:CFX18029.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 224.0
  • Bit_score: 256
  • Evalue 3.10e-65
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 225.0
  • Bit_score: 228
  • Evalue 1.40e-57

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Taxonomy

Syntrophomonas zehnderi → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGAATGATTACAATTTTCTTAGCGAGCAAGCGGAGTCTTGTTATTATACGTCTTTGGAGCAATTTGAAGACCTTTTCTCTGTTCTCGATTTTTTCCCTATTCCGGCAGAGGTTTTCAGTCCAAATGGACTTAGCTTATTTGTAAATAAAGAATTTTTAAGTTTTTTCCAAATTAAAAATGCAAATAAGCTTGTTGGAAAATTTAATATTTTAGACGATATTTATATAAATCAAAAGCTTGGGCTGAGTGACTATGTGCAGCGTGTCTTTTCCGGTGAGATTTTATCATTTTGCGATTTAAGAGTTCCTTATGAGGAAATATATATCCGCTACAATAATAATCCGGACAATCCTGCTGAGAATGATATGTACCAGGACATTACCTGCTTTCCTATATTTGGAGAAAATAAATTAATTTTGTGCATTGTATCCTTGTTTATGATTAAACGTGTTTATCAACCTCGACTGGATGCTATGAGAGCCAAGAAATATATTGATACACACTGGATTGATGATTTTAATCAGGATAAGGTGGCGGCAAATGCGGGCTTAAGTCCAAATCATCTTACTCGATTATTTAAAAAATTTATTGGTAAAACGCCATATAGCTATTATAAAGAGCTTAAGCTTGAAAAAATCAAGGAAGCATTAAGATATACAAATCTCAGCATCAGTTAG
PROTEIN sequence
Length: 226
MNDYNFLSEQAESCYYTSLEQFEDLFSVLDFFPIPAEVFSPNGLSLFVNKEFLSFFQIKNANKLVGKFNILDDIYINQKLGLSDYVQRVFSGEILSFCDLRVPYEEIYIRYNNNPDNPAENDMYQDITCFPIFGENKLILCIVSLFMIKRVYQPRLDAMRAKKYIDTHWIDDFNQDKVAANAGLSPNHLTRLFKKFIGKTPYSYYKELKLEKIKEALRYTNLSIS*