ggKbase home page

scn_reactorb_scaffold_8801_21

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 17568..18239

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUP2_SYNGF similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 223.0
  • Bit_score: 294
  • Evalue 5.60e-77
DNA binding HTH domain, AraC-type {ECO:0000313|EMBL:CFX18029.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 223.0
  • Bit_score: 330
  • Evalue 1.70e-87
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 223.0
  • Bit_score: 294
  • Evalue 1.60e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophomonas zehnderi → Syntrophomonas → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGTTTAAAACAAATGGTGATATTATATTGATAAATGAAGCTGTTCTAAAAATGTGGAACGTAAAGGATTCAGCTCAAATTATTGGGAACTACAACTTGCTTAAAGATAGCTTTGTCAATGAACAATTTGGACTTAAGGATTACATACGCAGGGCATTCCAAGGAGAGTTTGTTATTATTCCTGATATAAAACTTCCATTAGAAAGCTTCTGGGAATGGTACAAAACAAGAAGTGCAGTATACAATATTGAAGCAATCTATACAGATATTTTAAACTTCCCTATTTTAGATGATAAGGGAAGAATGATTTATATGATGAGCATCTTCTTTACGAGCAGAATTTACCAAGGAAAATCAGATATCGCAAGAATCAGAGAGTATCTTGAAAATCATTGGAAAGAAGAATTTGATATTGAAAAGCTTTCGCAGGCTGTTTATTTAAGTCCGTCCCAGCTTTCGCGACTATTCAAAAAAAACAATGGAATGACACCATTTAACTATTTTCAGGAATTTAAGATAAATCGACTAAAAGAAGCACTAAGGGATAAAAATCTAAGTATATCCGAGGCCTTTGAATCCTGCGGGTTTAAATATTCCGGAAACTGCACCAGGTTTTTCAAGAAAAAGGTTGGCATGACACCAAATGAATATCGAAAAAACCATAGAAAATAA
PROTEIN sequence
Length: 224
MFKTNGDIILINEAVLKMWNVKDSAQIIGNYNLLKDSFVNEQFGLKDYIRRAFQGEFVIIPDIKLPLESFWEWYKTRSAVYNIEAIYTDILNFPILDDKGRMIYMMSIFFTSRIYQGKSDIARIREYLENHWKEEFDIEKLSQAVYLSPSQLSRLFKKNNGMTPFNYFQEFKINRLKEALRDKNLSISEAFESCGFKYSGNCTRFFKKKVGMTPNEYRKNHRK*