ggKbase home page

scn_reactorb_scaffold_21870_20

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(23122..23856)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML68_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 243.0
  • Bit_score: 319
  • Evalue 2.30e-84
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 243.0
  • Bit_score: 319
  • Evalue 6.50e-85
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 243.0
  • Bit_score: 319
  • Evalue 3.20e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGATAATGAAAGCAATTTTATGGGAGGAATGGGTTATATTCAAAAGAAAGTTCTGGAAGATAACATCTGGCGCTTTAGTGAGCCCGATAATGTATATGGTTGCATTTGGCTGGGGTTTAGGCTCAGGCATAGAGCTTAACGGACATCCTTACATTTACTTTATAATACCCGGAGTCATATCACTTACAACAATGAACACAAGCTATTCGACGGTTTCGACAAATCTGAGCATTAATAAGCTATATGACAAAACCTTTGAGCAGTATCTCATATCACCTATACCTATATATAGCTTTGTTGCAGGAAAGGTTATAGCCGGAGCACTAAGAGGTATGTATGCAGGGGCTATAATTATAGGAATGTCATATATAGCCAGAGTAAATATACACATAAGCCTAGGCTTTATGTTAATAATGCTTCTAAATGGACTGGCATTTGCATCATTAGGTTTTTTTGCCGCATTGATAGCAGATTCGCACGCTGATATGAATAGATTCAGCACATATTTCATCATGCCTATGACATTTTTATGCGGAACATTTTTCTCACCGGATAAGCTTCCGTCATTTATAAAAAACATTATATATGTATTGCCTTTAACACATGCGAGTGAAGCTCTCAGAGGCATGGCAATAGGAAATCCGCTCAATTTTGTAAATTTGGCAGTGATACTTTCATATTTTGTTGTTTTATTTGCTTTAGCTGTAAGACAATGCTATAAGGCTACGGACTGA
PROTEIN sequence
Length: 245
MIMKAILWEEWVIFKRKFWKITSGALVSPIMYMVAFGWGLGSGIELNGHPYIYFIIPGVISLTTMNTSYSTVSTNLSINKLYDKTFEQYLISPIPIYSFVAGKVIAGALRGMYAGAIIIGMSYIARVNIHISLGFMLIMLLNGLAFASLGFFAALIADSHADMNRFSTYFIMPMTFLCGTFFSPDKLPSFIKNIIYVLPLTHASEALRGMAIGNPLNFVNLAVILSYFVVLFALAVRQCYKATD*