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scn_reactorb_scaffold_21870

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_21870_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146..424)
DNA (279bp) protein (93aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
CRISPR-associated protein Cas2 n=1 Tax=[Clostridium] glycolicum RepID=UPI00036EC980
CRISPR-associated Cas2 family protein
scn_reactorb_scaffold_21870_2
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(445..1437)
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
CRISPR-associated protein Cas1 n=1 Tax=[Clostridium] glycolicum RepID=UPI00036FA117
maturase-related protein
scn_reactorb_scaffold_21870_3
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1457..1951)
DNA (495bp) protein (165aa)
CRISPR-associated RecB-family exonuclease Cas4 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHF4_ACEWD
cas4; CRISPR-associated RecB-family exonuclease Cas4
CRISPR-associated RecB-family exonuclease Cas4 {ECO:0000313|EMBL:AFA49664.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
scn_reactorb_scaffold_21870_4
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1973..3958)
DNA (1986bp) protein (662aa)
ATP-dependent RNA helicase n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ72_CLOTA
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDI49495.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
scn_reactorb_scaffold_21870_5
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3981..4322)
DNA (342bp) protein (114aa)
ATP-dependent RNA helicase n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ72_CLOTA
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:CDI49495.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
scn_reactorb_scaffold_21870_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4452..5573)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26384.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
CRISPR-associated protein, Cas5t family
scn_reactorb_scaffold_21870_7
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5597..6484)
DNA (888bp) protein (296aa)
CRISPR-associated autoregulator DevR familyprotein n=1 Tax=Clostridium tetani 12124569 RepID=U6EV75_CLOTA
CRISPR-associated autoregulator DevR familyprotein
CRISPR-associated autoregulator DevR familyprotein {ECO:0000313|EMBL:CDI49497.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
scn_reactorb_scaffold_21870_8
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6477..7544)
DNA (1068bp) protein (356aa)
Conserved protein n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q895X3_CLOTE
hypothetical protein
Conserved protein {ECO:0000313|EMBL:AAO35717.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
scn_reactorb_scaffold_21870_9
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7949..8707)
DNA (759bp) protein (253aa)
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:EDR97020.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDR97020.1};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
CRISPR-associated endoribonuclease Cas6 n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MG00_9FIRM
cas6; CRISPR-associated Cas family protein
scn_reactorb_scaffold_21870_10
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8858..9142)
DNA (285bp) protein (95aa)
Transposase IS3/IS911 family protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TQF8_THETC
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADL69192.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
scn_reactorb_scaffold_21870_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10227..11744
DNA (1518bp) protein (506aa)
Succinate CoA transferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VMP3_CLOBI
Acetyl-CoA hydrolase {ECO:0000313|EMBL:KGG81312.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
succinate CoA transferase
scn_reactorb_scaffold_21870_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11817..12335
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288ABCC
Putative membrane protein {ECO:0000313|EMBL:EDT27188.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
scn_reactorb_scaffold_21870_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

12369..13253
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FGZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01332.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
scn_reactorb_scaffold_21870_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13318..14343)
DNA (1026bp) protein (342aa)
S-layer domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FV29_9CLOT
S-layer domain-containing protein {ECO:0000313|EMBL:EMS73019.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
putative S-layer protein
scn_reactorb_scaffold_21870_15
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14657..15451
DNA (795bp) protein (265aa)
fabG1; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Clostridium ultunense Esp RepID=M1ZI41_9CLOT
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CCQ93597.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
scn_reactorb_scaffold_21870_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15753..16337)
DNA (585bp) protein (195aa)
cbiH1; precorrin-3B C17-methyltransferase CbiH1 (EC:2.1.1.131)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BGR7_9CLOT
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:ERI71395.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
scn_reactorb_scaffold_21870_17
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16547..18448)
DNA (1902bp) protein (634aa)
chlI1; magnesium chelatase 67 kDa subunit ChlI (EC:6.6.1.1)
magnesium chelatase n=1 Tax=Fusobacterium russii RepID=UPI0003A143A4
Uncharacterized protein {ECO:0000313|EMBL:KAJ52350.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
scn_reactorb_scaffold_21870_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18420..19430)
DNA (1011bp) protein (337aa)
magnesium chelatase (EC:6.6.1.1)
Magnesium chelatase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ78_ALKOO
Magnesium chelatase {ECO:0000313|EMBL:KAJ52351.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
scn_reactorb_scaffold_21870_19
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19432..23097)
DNA (3666bp) protein (1222aa)
cobN1; cobaltochelatase, CobN subunit (EC:6.6.1.2)
Cobaltochelatase, CobN subunit {ECO:0000313|EMBL:AEB67479.1}; EC=6.6.1.2 {ECO:0000313|EMBL:AEB67479.1};; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
Cobaltochelatase, CobN subunit n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BXG6_METCG
scn_reactorb_scaffold_21870_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23122..23856)
DNA (735bp) protein (245aa)
ABC-2 type transporter n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML68_ALKOO
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_21870_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23858..24697)
DNA (840bp) protein (280aa)
ABC transporter related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8ML67_ALKOO
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABW17884.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_21870_22
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24794..25819)
DNA (1026bp) protein (342aa)
CbiG protein n=1 Tax=Methanoculleus sp. CAG:1088 RepID=R7Q0K7_9EURY
CbiG protein {ECO:0000313|EMBL:CDF30496.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source="Methanoculleus sp. CAG:1088.;"
Cobalamin biosynthesis protein CbiG
scn_reactorb_scaffold_21870_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25816..26571)
DNA (756bp) protein (252aa)
cbiF; precorrin-4 C11-methyltransferase CbiF (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase n=1 Tax=Dorea sp. 5-2 RepID=R9NAP2_9FIRM
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:EOS80178.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
scn_reactorb_scaffold_21870_24
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(26584..27186)
DNA (603bp) protein (201aa)
Precorrin isomerase (EC:5.4.1.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42550.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
scn_reactorb_scaffold_21870_25
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27325..28293)
DNA (969bp) protein (323aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQM6_9FIRM
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF09173.1}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
scn_reactorb_scaffold_21870_26
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28533..29588)
DNA (1056bp) protein (352aa)
Iron complex transport system permease protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NA25_9FIRM
Iron complex transport system permease protein {ECO:0000313|EMBL:CDF10299.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
iron complex transport system permease protein
scn_reactorb_scaffold_21870_27
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29697..30908)
DNA (1212bp) protein (404aa)
Iron complex transport system substrate-binding protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DN93_9FIRM
Iron complex transport system substrate-binding protein {ECO:0000313|EMBL:CCX81668.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
iron complex transport system substrate-binding protein
scn_reactorb_scaffold_21870_28
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31542..32897
DNA (1356bp) protein (452aa)
Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFS4_ALKOO
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABW17713.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_21870_29
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33013..33558
DNA (546bp) protein (182aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFS3_ALKOO
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ABW17712.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_21870_30
Clostridium sp. CAG:1193, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33848..34585)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1193 RepID=R5J8K1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY45192.1}; TaxID=1262771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1193.;"
Displaying items 1-30 of 31 in total

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