ggKbase home page

scn_reactorb_scaffold_25518_15

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(12881..13570)

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 224.0
  • Bit_score: 363
  • Evalue 1.80e-97
Uracil-DNA glycosylase n=1 Tax=Clostridium intestinale URNW RepID=U2MZY4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 223.0
  • Bit_score: 354
  • Evalue 4.60e-95
Uracil-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 225.0
  • Bit_score: 356
  • Evalue 4.50e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptococcaceae bacterium BRH_c23 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 690
ATGATAAAATTTGAAAATGACTGGCAGGATTTAATATTAGATGAATTTGAAAAAGAGTATTATAAAGAACTTAGAAGCTTTTTGATTAAGGAATATAAAACGAAATACATATATCCAAATATGCATGATATGTTCAATGCATTGCATTATACAGCATATAAGGATGTAAAGGTCTTACTGTTAGGTCAAGATCCTTATCACGAGCCTAATCAGGCTCATGGACTAAGCTTTTCAGTTAAAGTCGGTATACAGGCGCCGCCATCACTGCAAAATATATTTTTAGAGTTAAAGAATGACTTAGACTGTTACATACCTAACAACGGTTATCTAAAAAAATGGGCAGATCAAGGTGTTATGCTGTTAAATACTGTTTTGACAGTCGAAAGGGCGAAAGCTAATTCTCACAAGGGAAAAGGCTGGGAAATATTTACTGATAGGATAATTTCACTGTTAAATGAAAGACAAGATCCAATTGTATTTATATTGTGGGGAAATAATGCTAAGTCTAAAACAAGCTTAATTACTAATCCAAAGCATTATATTATACAATCCTCTCATCCAAGCCCATACTCAGCTTCATATGGATTTTTAGGAAGCAAGCCTTTTTCAAAAACAAATAAGTTTCTCGAATCAATTGGAAAGTCTCCAATTGATTGGCAAATAGAAAATGTAGAAACTGCTGCAAAATAA
PROTEIN sequence
Length: 230
MIKFENDWQDLILDEFEKEYYKELRSFLIKEYKTKYIYPNMHDMFNALHYTAYKDVKVLLLGQDPYHEPNQAHGLSFSVKVGIQAPPSLQNIFLELKNDLDCYIPNNGYLKKWADQGVMLLNTVLTVERAKANSHKGKGWEIFTDRIISLLNERQDPIVFILWGNNAKSKTSLITNPKHYIIQSSHPSPYSASYGFLGSKPFSKTNKFLESIGKSPIDWQIENVETAAK*