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scn_reactorb_scaffold_25518

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_25518_1
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..489)
-----------------
DNA (489bp)
protein (163aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU99_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EET87197.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
scn_reactorb_scaffold_25518_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

629..1987
-----------------
DNA (1359bp)
protein (453aa)
Transcriptional regulator, GntR family with aminotransferase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6A4_9CLOT
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:EHJ00820.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
transcriptional regulator
scn_reactorb_scaffold_25518_3
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2301..2858
-----------------
DNA (558bp)
protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIG7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42419.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_25518_4
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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2924..3697
-----------------
DNA (774bp)
protein (258aa)
Nucleotidyltransferase domain protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FQE9_9BACT
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:ERJ13259.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
scn_reactorb_scaffold_25518_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3782..3946
-----------------
DNA (165bp)
protein (55aa)
MutT/Nudix family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0E5_9FIRM
MutT/Nudix family protein {ECO:0000313|EMBL:CCY91051.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
phosphohydrolase
scn_reactorb_scaffold_25518_6
unknown

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3910..4062
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

scn_reactorb_scaffold_25518_7
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4124..4639
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JJ79_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY67125.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
scn_reactorb_scaffold_25518_8
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4590..5360
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AI71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65564.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
scn_reactorb_scaffold_25518_9
unknown

Not on your lists

5574..5699
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

scn_reactorb_scaffold_25518_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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5715..6557
-----------------
DNA (843bp)
protein (281aa)
id=3938033 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_25518_11
Clostridium sp. CAG:524, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6597..7010
-----------------
DNA (414bp)
protein (138aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:524 RepID=R6B8E8_9CLOT
NUDIX hydrolase {ECO:0000313|EMBL:CDA60478.1}; TaxID=1262817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:524.;"
NUDIX hydrolase
scn_reactorb_scaffold_25518_12
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7060..9249
-----------------
DNA (2190bp)
protein (730aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
DNA topoisomerase III n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2I9_9CLOT
DNA topoisomerase III
scn_reactorb_scaffold_25518_13
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9482..11425)
-----------------
DNA (1944bp)
protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NX81_9FIRM
scn_reactorb_scaffold_25518_14
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11978..12724
-----------------
DNA (747bp)
protein (249aa)
4Fe-4S binding domain protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MNI5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFW24323.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
scn_reactorb_scaffold_25518_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12881..13570)
-----------------
DNA (690bp)
protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
Uracil-DNA glycosylase n=1 Tax=Clostridium intestinale URNW RepID=U2MZY4_9CLOT
Uracil-DNA glycosylase
scn_reactorb_scaffold_25518_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13711..14454)
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002EFFD86
Uncharacterized protein {ECO:0000313|EMBL:EHM50941.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
scn_reactorb_scaffold_25518_17
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14679..15716
-----------------
DNA (1038bp)
protein (346aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SNB9_CLOC7
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADL53911.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
scn_reactorb_scaffold_25518_18
unknown

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comp(15843..17234)
-----------------
DNA (1392bp)
protein (464aa)

This feature has no annotations

Displaying 18 items

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