ggKbase home page

scn_reactorb_scaffold_15261_16

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 15238..16719

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=4519507 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Firmicute_51_9 organism_group=Firmicute similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 459.0
  • Bit_score: 333
  • Evalue 3.10e-88
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKQ53597.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 407.0
  • Bit_score: 228
  • Evalue 1.50e-56
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 449.0
  • Bit_score: 216
  • Evalue 9.20e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1482
ATGTTGTGCGGGCAAAAACACGATATAATGTCTGAGCTTAAGAAGAAGCTGAGCTCGGATATTTACACAAATGAAAAAGGTCTTGAGACAAAGACAGCACATAAGAGAGATTATGATACAATAACAGAAACTGACTTAATAATTTTAAATAAGTTTGTGACAGCACCTCTTATTCTTTTTAATTATGAAAATATTGCATTTATGAATAGCAGTTGCAGCTTGTTGTTTGGCTACAGCGATTTTGATATGCAAAAACCAATGGAAGCAAAGAAGTTTTTTGTTGATGATGAGTTTACTGGTACAATTGAAAGAATACTTAATAATGATGAAGGCTTAGAATTGCCTGATACCTACATCATGACAAAAACTCTTGAAAAAATATTTATAAACTTAGAGCATAAAGTTGTTTTATATAAATCGAAAAAATTTATTTTTGCTCATTTGCATGATATGACAGAGAAGCTCGCGACACAAGCTAAGCTAATAAAGGCTTCAATAGTAAGGGACTTAATGCTTGATATAAGTCAATCCATAATTAAAACAGAGGATATCAATCAGGTATATCAGCTTATATTGGAAAACGCAGTAAAGGCTCTGGAAAAAGCAAGGCTGGGTACAATATTTATCAAAAAAGATGGTTTCTATAAGGTGGTAGCTCATACTGGATTTTCTGAAGAAATATTAAAATTTCAGCTTAGTCCGGAAAAAACATTTTTATACAGAGCAACTGGCGGCAAAATGGATAAAATCAAAATTATAGAAGATTTAAGATCGTATATCAACTATTATGCTATAAAGACTAACGACGGAGAAGAGTATATTAAATCATGCATAACAACTCCTATAAATATAAACGGGGAGACTTACGGAATGATAAATATAGACTCCGTTGAGCTTAATGCCTTTAATGATGAAGATATTAAGTACATGGAATTTATGAAAAACAGTATTGAAATAGCTATATCAAATTTCCTGCAATATGAGGAAAGGGTGTATTTTGCTAATCGTGACAGTTTGACTAAATTATACAATAGAGTTTATATTGAAGAAAAGTACGAAAAATTTAAAGAGGAAGCTTTAGAGAATAATTCAATCTTTTATATGGTTATATTTGACATTGATCACCTAAAACATATTAATGATAAATATGGTCATAGCGAGGGAGATATGGTCATACTCAAGGTTACCGATGAGCTTAAAACTCTAGTGACTGAAAATGATATTTTATCAAGAATTGGCGGAGACGAGTTTTTAGGTATATTTAGTGTCATTGATAAAGATGCCTTGTTTAATAAAATTAAAAACGCTTTAATAAATGTAAATAAAAACACTGAAATAGATAATCAAAATATATCCTGTTCATTTAGCTTTGGAATATCAACCTTTGGTGAGGAAGGACAGGAATTTAAAGAATTATATAAAAAAGCTGACGAAAGAATGTACATGATAAAAAACCACAGAGAAAATGTGGGTTATATTTAG
PROTEIN sequence
Length: 494
MLCGQKHDIMSELKKKLSSDIYTNEKGLETKTAHKRDYDTITETDLIILNKFVTAPLILFNYENIAFMNSSCSLLFGYSDFDMQKPMEAKKFFVDDEFTGTIERILNNDEGLELPDTYIMTKTLEKIFINLEHKVVLYKSKKFIFAHLHDMTEKLATQAKLIKASIVRDLMLDISQSIIKTEDINQVYQLILENAVKALEKARLGTIFIKKDGFYKVVAHTGFSEEILKFQLSPEKTFLYRATGGKMDKIKIIEDLRSYINYYAIKTNDGEEYIKSCITTPININGETYGMINIDSVELNAFNDEDIKYMEFMKNSIEIAISNFLQYEERVYFANRDSLTKLYNRVYIEEKYEKFKEEALENNSIFYMVIFDIDHLKHINDKYGHSEGDMVILKVTDELKTLVTENDILSRIGGDEFLGIFSVIDKDALFNKIKNALINVNKNTEIDNQNISCSFSFGISTFGEEGQEFKELYKKADERMYMIKNHRENVGYI*