ggKbase home page

scn_reactorb_scaffold_15261

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_15261_1
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..657
DNA (657bp) protein (219aa)
Accessory gene regulator protein C, putative n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0I3_CLONN
accessory gene regulator protein C
Accessory gene regulator protein C, putative {ECO:0000313|EMBL:ABK61719.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
scn_reactorb_scaffold_15261_2
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

864..1988
DNA (1125bp) protein (375aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYW3_THEOJ
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADL08537.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
scn_reactorb_scaffold_15261_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1970..2746
DNA (777bp) protein (259aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NQY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGG81370.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
sugar ABC transporter permease
scn_reactorb_scaffold_15261_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2762..3586
DNA (825bp) protein (275aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5W4_DESAS
Uncharacterized protein {ECO:0000313|EMBL:KGG81371.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
binding-protein-dependent transport system inner membrane protein
scn_reactorb_scaffold_15261_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3583..5304
DNA (1722bp) protein (574aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CP16_9CLOT
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EOD00441.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
RND family efflux transporter MFP subunit
scn_reactorb_scaffold_15261_6
unknown

Not on your lists

5301..6344
DNA (1044bp) protein (348aa)

This feature has no annotations

scn_reactorb_scaffold_15261_7
unknown

Not on your lists

6528..6938
DNA (411bp) protein (137aa)

This feature has no annotations

scn_reactorb_scaffold_15261_8
unknown

Not on your lists

7009..7863
DNA (855bp) protein (285aa)

This feature has no annotations

scn_reactorb_scaffold_15261_9
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7886..9013
DNA (1128bp) protein (376aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PY21_CLOSD
ycjV; putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter {ECO:0000313|EMBL:CBH21336.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
scn_reactorb_scaffold_15261_10
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8995..9783
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NQY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGG81370.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
binding-protein-dependent transport system inner membrane protein
scn_reactorb_scaffold_15261_11
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9808..10626
DNA (819bp) protein (273aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2W7_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KGG81371.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
binding-protein-dependent transport system inner membrane protein
scn_reactorb_scaffold_15261_12
unknown

Not on your lists

10683..12206
DNA (1524bp) protein (508aa)

This feature has no annotations

scn_reactorb_scaffold_15261_13
unknown

Not on your lists

12203..13273
DNA (1071bp) protein (357aa)

This feature has no annotations

scn_reactorb_scaffold_15261_14
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13487..13681
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NLN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGK87031.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
scn_reactorb_scaffold_15261_15
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..15198
DNA (1506bp) protein (502aa)
4Fe-4S binding domain protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2LDI2_9FIRM
Iron hydrogenase {ECO:0000313|EMBL:KGK87032.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
Fe-hydrogenase large subunit family protein
scn_reactorb_scaffold_15261_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15238..16719
DNA (1482bp) protein (494aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=4519507 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Firmicute_51_9 organism_group=Firmicute
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKQ53597.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scn_reactorb_scaffold_15261_17
unknown

Not on your lists

comp(16872..17072)
DNA (201bp) protein (67aa)

This feature has no annotations

scn_reactorb_scaffold_15261_18
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17251..19686
DNA (2436bp) protein (812aa)
DEAD_2 domain protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BJ55_THEXL
DEAD_2 domain-containing protein
DEAD_2 domain protein {ECO:0000313|EMBL:AEF17872.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
scn_reactorb_scaffold_15261_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20233..21393
DNA (1161bp) protein (387aa)
Cysteine desulfurase {ECO:0000313|EMBL:EOC99931.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EOC99931.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
iscS1; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATH6_9CLOT
scn_reactorb_scaffold_15261_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21450..22616
DNA (1167bp) protein (389aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
thiI; tRNA sulfurtransferase ThiI (EC:2.8.1.4)
Probable tRNA sulfurtransferase n=1 Tax=Clostridium ultunense Esp RepID=M1Z4V8_9CLOT
scn_reactorb_scaffold_15261_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23259..24116
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0F3_OSCVS
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ABW19482.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
hypothetical protein
scn_reactorb_scaffold_15261_22
Methanosarcina sp. 2.H.T.1A.6, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24212..25147
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG19653.1}; TaxID=1483599 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.6.;"
hypothetical protein
scn_reactorb_scaffold_15261_23
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25222..25749)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AYQ5_CLOA9
Uncharacterized protein {ECO:0000313|EMBL:KGG79879.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_15261_24
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25942..27636)
DNA (1695bp) protein (565aa)
Oligoendopeptidase F n=1 Tax=Clostridium novyi (strain NT) RepID=A0PY71_CLONN
Oligoendopeptidase F {ECO:0000313|EMBL:KGM98048.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
oligoendopeptidase F
scn_reactorb_scaffold_15261_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27991..29307
DNA (1317bp) protein (439aa)
Fe-S oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXC5_9CLOT
Fe-S oxidoreductase {ECO:0000313|EMBL:EOD01279.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scn_reactorb_scaffold_15261_26
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29291..30628
DNA (1338bp) protein (446aa)
GTPase Der n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CG39_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
engA; GTP-binding protein EngA
scn_reactorb_scaffold_15261_27
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

30652..31230
DNA (579bp) protein (193aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVQ7_THESW
Glycerol-3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
scn_reactorb_scaffold_15261_28
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31344..32333
DNA (990bp) protein (330aa)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B238_CLOA9
scn_reactorb_scaffold_15261_29
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

32371..34401
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BGW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64343.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
transcriptional regulator
scn_reactorb_scaffold_15261_30
unknown

Not on your lists

comp(34352..34516)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy