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scn_reactorb_scaffold_47206_6

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 4489..5745

Top 3 Functional Annotations

Value Algorithm Source
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 431.0
  • Bit_score: 430
  • Evalue 1.70e-117
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 433.0
  • Bit_score: 426
  • Evalue 8.50e-117
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EEE4_CLOPA similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 433.0
  • Bit_score: 426
  • Evalue 3.00e-116

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Taxonomy

Clostridium sp. HMP27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1257
ATGGGAAAAATATATATCGAACCCTCAATAAATCTAAAAGGTGATGTGTGGATTCCTCCATCAAAAAGCCTCAGTCACAGGGCAATTATATGTGCCTCATTGTGCAGTCAAGGAGAAAGCTTAATTGATAATGTAATACTTTCAGAGGATATAAAAGCGACAATTTCTTCTATGGAAGCTTTAGGAGCAAAAATCGATGTGCAGGCTGTCGTGGAAGACAGATATAGATTAAAGATATCACGATATAATACCTCTGTAAAGGAAGCTGTTATACACTGCAATGAATCCGGCTCAACACTTAGATTTATAATACCGATAGCGTTGGCATTATCTGATAAAAATACATTTACCGGAACAGGAAAGCTTATAGAAAGACCGTTAGAGCCATATTATAAAATTTTTGATGTACAAAATATAATCTATTCAAATGATAGTGGAAAACTACCGTTAAAAACAGAGGGAAGACTAAAAAGCTCCTGCTTTACAATCAAGGGTGATATAAGCTCCCAATTTGTATCAGGATTATTAATGGCACTGCCACTCCTTGACGGTGATTCTAAAATTATAGTTACAAACGACTTAGAATCAAAGCCTTATGTTGATTTAACCGTTGATATGCTAAAGAAATTTGGTATTGATATAAAAAATAATGACTATAAGGAATTTATAATAAAAGGAAACTCAGAATATAGTGCTGCTGATTATCATGTAGAAGCAGATTATTCTCAAGCAGCATTTTTTTTAACAGCTAATTTTTTAGGAAGTAACGTAAATTGCTTAGGCTTAAATGAAAATTCCATTCAAGGTGATAAAGCAATTGTTGATATTCTATACAATATGAAAAATTCAACTACCAATGAAATAACAATAGATGCATCTCAAATTCCAGACTTAATACCAATAATTGCAGTAGCTTCATCATTCCTAGAGAATAAAACTACTTATATAGAAAATGCAAAAAGATTAAGAATTAAAGAGTCCGACAGATTATATGCTATATGCTCGCAATTAAAAAAGATAGGTGCTGATGTGGAGGAATTAGAAGATGGACTTGTGATAAGAGGTAAAGCTGTATTAAATGGATGTAACAGTGCAGATACTGTGAACAGCTTTAATGATCACAGAATAGCTATGGCTCTTGCAATAGCAGCATCGAAATGTGAAAGAAATATAGTTCTTGAGGATTATGAGGCAGTAACAAAGTCATATCCAAATTTTTGGATAGACTATCTAAGCTTAGGTGGTAAAATAAATTAA
PROTEIN sequence
Length: 419
MGKIYIEPSINLKGDVWIPPSKSLSHRAIICASLCSQGESLIDNVILSEDIKATISSMEALGAKIDVQAVVEDRYRLKISRYNTSVKEAVIHCNESGSTLRFIIPIALALSDKNTFTGTGKLIERPLEPYYKIFDVQNIIYSNDSGKLPLKTEGRLKSSCFTIKGDISSQFVSGLLMALPLLDGDSKIIVTNDLESKPYVDLTVDMLKKFGIDIKNNDYKEFIIKGNSEYSAADYHVEADYSQAAFFLTANFLGSNVNCLGLNENSIQGDKAIVDILYNMKNSTTNEITIDASQIPDLIPIIAVASSFLENKTTYIENAKRLRIKESDRLYAICSQLKKIGADVEELEDGLVIRGKAVLNGCNSADTVNSFNDHRIAMALAIAASKCERNIVLEDYEAVTKSYPNFWIDYLSLGGKIN*