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scn_reactorb_scaffold_47206

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_47206_1
unknown

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3..131
DNA (129bp) protein (43aa)

This feature has no annotations

scn_reactorb_scaffold_47206_2
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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85..798
DNA (714bp) protein (238aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ53_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX43365.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_47206_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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791..2395
DNA (1605bp) protein (535aa)
Putative membrane protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DYG8_CLOSO
ABC transporter permease {ECO:0000313|EMBL:CEN71780.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
ABC transporter permease
scn_reactorb_scaffold_47206_4
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2500..3357
DNA (858bp) protein (286aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EET87529.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EET87529.1};; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PTA9_9CLOT
phospho-2-dehydro-3-deoxyheptonate aldolase
scn_reactorb_scaffold_47206_5
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3440..4483
DNA (1044bp) protein (348aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
aroB; 3-dehydroquinate synthase AroB (EC:4.2.3.4)
3-dehydroquinate synthase n=3 Tax=Clostridium difficile RepID=T2UTP9_CLODI
scn_reactorb_scaffold_47206_6
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4489..5745
DNA (1257bp) protein (419aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EEE4_CLOPA
scn_reactorb_scaffold_47206_7
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5786..6790
DNA (1005bp) protein (335aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Chorismate synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWM7_CLOA9
Chorismate synthase
scn_reactorb_scaffold_47206_8
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6893..7216)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG79470.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_47206_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7407..8333)
DNA (927bp) protein (309aa)
Putative Fe-S oxidoreductase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AY54_9CLOT
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:EOD01597.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
putative radical SAM protein
scn_reactorb_scaffold_47206_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8588..8806
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01596.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
M1_3593; hypothetical protein
scn_reactorb_scaffold_47206_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9004..9195)
DNA (192bp) protein (64aa)
DUF378 domain-containing protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWN0_9CLOT
DUF378 domain-containing protein {ECO:0000313|EMBL:EOD01593.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
scn_reactorb_scaffold_47206_12
Paenibacillus sp. IHB B 3415, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(9265..10623)
DNA (1359bp) protein (453aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQL6_CLOPH
Uncharacterized protein {ECO:0000313|EMBL:KHL94418.1}; TaxID=867080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHB B 3415.;"
hypothetical protein
scn_reactorb_scaffold_47206_13
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10589..13882)
DNA (3294bp) protein (1098aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZES3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ96799.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Cna B domain-containing protein
Displaying 13 items

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