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scn_reactorb_scaffold_60594_10

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 13236..14531

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 430.0
  • Bit_score: 656
  • Evalue 2.60e-185
diaminopimelate decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287F56B similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 431.0
  • Bit_score: 665
  • Evalue 2.30e-188
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 430.0
  • Bit_score: 607
  • Evalue 2.80e-171

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Taxonomy

Clostridium sp. NCR → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAATTGCAAGGCAATATGTCAATTGTAGGCAATGAACTTTATATAGCAGGTATAAGCTGTAAAAAGCTTAAGGAGGAATACGAAACCCCGTTGTACGTATTTGATGAAAGGCTTGTAAGAAGCAATTGCCAAGAATTTGTAAAACATTTTAGAGTTAATGAGAATAAGAATAGAGTAGCATATGCCGGAAAAGCATTTTTGCCGATGTATATGTGCAATATCATAGATGAGGAAGGCTTATACCTTGACGTAGTCTCTGGAGGAGAATTATATACAGCGAAAAAAGCAAATTTTCCAATGAATAAGGTATTGTTTCATGGGAACAACAAAACTGATGAAGAAGTAGAAATGGGCGTTGAGCTTGGTGTCGGAAGATTTGTAGTTGATAATTACCGTGAGCTTAATCTGCTGGAGAAAATCTGCGAGAAAAAGAATAAAAAGCAAAAGGTATATCTTAGAATTGCTCCGGGCATAGACGTGCATACGCATAGCTATATACAAACAGGACAAATTGATTCAAAATTTGGATTTACCTTGTCAAATGGAGATTTATACAAGGCAGCTGATATGATTAAAAAATATAAAAACATAGAGCTGGTAGGACTCCATGCACATATAGGCTCTCAAATACTAGAGCTGGAACCATACTTGTATGAAACAGAAATAATGATGAATTTAGTAAAGGAAATTAGACATAGGTATAATATTGAGATTAAAGAGGTCGATTTAGGCGGAGGCTTTGGTGTTTACTATACAAAAGAGGATAATCCAAGAAGCATAAAGGACTTTTGCGAAGGCATAATAAAAACTGCAAAAAAAGTCTGCGCGGAAATGGAAATAGAAGCTCCAATCTTAATAATAGAACCGGGTAGGTCTATAGTTGCAAATGCTGGGAGTACATTATACACAGTCGGATCAATAAAGAATATAGAAAATGTGAGGACTTATATAAGCATAGACGGAGGAATGACAGATAATATACGACCATCATTGTACAATGCAAAATATGAGTGCGCTGTTGCCAATAAAATGAGAGAAAGATTAAAAAATAAAATTACAATATCTGGAAAATGCTGTGAAAGTGGAGATATACTGATAAAGGAAATAGCATCGGCAGAGGTTGAAACAGGAGATATTCTAGTAGTTTTTTCAACAGGAGCATATGGATATTCAATGTCGTCAAATTACAATAAGATGGCAAAGCCAGCAGTAGTTTCAGTAAAGAATGGAAGCAGCAGGCTGATTTGTAAAAGACAAAGCTATGAAGAGCTTTTGAGTTTAGAAATTATATAA
PROTEIN sequence
Length: 432
MKLQGNMSIVGNELYIAGISCKKLKEEYETPLYVFDERLVRSNCQEFVKHFRVNENKNRVAYAGKAFLPMYMCNIIDEEGLYLDVVSGGELYTAKKANFPMNKVLFHGNNKTDEEVEMGVELGVGRFVVDNYRELNLLEKICEKKNKKQKVYLRIAPGIDVHTHSYIQTGQIDSKFGFTLSNGDLYKAADMIKKYKNIELVGLHAHIGSQILELEPYLYETEIMMNLVKEIRHRYNIEIKEVDLGGGFGVYYTKEDNPRSIKDFCEGIIKTAKKVCAEMEIEAPILIIEPGRSIVANAGSTLYTVGSIKNIENVRTYISIDGGMTDNIRPSLYNAKYECAVANKMRERLKNKITISGKCCESGDILIKEIASAEVETGDILVVFSTGAYGYSMSSNYNKMAKPAVVSVKNGSSRLICKRQSYEELLSLEII*