ggKbase home page

scn_reactorb_scaffold_60594

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_60594_1
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(234..2939)
DNA (2706bp) protein (902aa)
mgtA; Mg2+-importing ATPase (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J763_9FIRM
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:CDB46162.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
scn_reactorb_scaffold_60594_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3437..3991)
DNA (555bp) protein (185aa)
BioY family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D6A9_CLODI
BioY family protein {ECO:0000313|EMBL:EQF23419.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
bioY; biotin synthase
scn_reactorb_scaffold_60594_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4207..4800
DNA (594bp) protein (198aa)
Nitroreductase family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D8K4_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:ERI92663.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
nitroreductase
scn_reactorb_scaffold_60594_4
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4968..5225)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=C9LC98_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EGG81377.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
hypothetical protein
scn_reactorb_scaffold_60594_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5307..7187)
DNA (1881bp) protein (627aa)
ABC transporter ATP-binding protein HlyB family n=1 Tax=Clostridium sp. CAG:242 RepID=R6DNI7_9CLOT
ABC transporter ATP-binding protein HlyB family {ECO:0000313|EMBL:CDA79447.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC transporter related
scn_reactorb_scaffold_60594_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7177..8922)
DNA (1746bp) protein (582aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D5J5_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA79446.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
multidrug ABC transporter
scn_reactorb_scaffold_60594_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9144..9806)
DNA (663bp) protein (221aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CUZ4_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA79445.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
putative two-component sensor histidine kinase
scn_reactorb_scaffold_60594_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(9912..10610)
DNA (699bp) protein (233aa)
LytTr DNA-binding domain protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EKU8_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:CCX93038.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
putative response regulatory protein
scn_reactorb_scaffold_60594_9
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10868..12514
DNA (1647bp) protein (549aa)
Sodium-dependent phosphate transporter n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYH5_9CLOT
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KGG80311.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Na/Pi-cotransporter family protein/PhoU family protein
scn_reactorb_scaffold_60594_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13236..14531
DNA (1296bp) protein (432aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
diaminopimelate decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287F56B
lysA; diaminopimelate decarboxylase
scn_reactorb_scaffold_60594_11
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14836..16041
DNA (1206bp) protein (402aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Aspartokinase n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MHI9_9CLOT
putative aspartate kinase, monofunctional class
scn_reactorb_scaffold_60594_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16055..17194
DNA (1140bp) protein (380aa)
amidohydrolase (EC:3.5.1.32)
N-acyl-L-amino acid amidohydrolase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FI30_9BACT
Amidohydrolase {ECO:0000313|EMBL:KGG79534.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
scn_reactorb_scaffold_60594_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17274..18164
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AW84_9CLOT
dihydrodipicolinate synthase
scn_reactorb_scaffold_60594_14
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18165..18995
DNA (831bp) protein (277aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQF8_9CLOT
Dihydrodipicolinate reductase
scn_reactorb_scaffold_60594_15
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19137..19661
DNA (525bp) protein (175aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=1 Tax=Turicibacter sp. HGF1 RepID=F0HER3_9FIRM
DapD; tetrahydrodipicolinate N-succinyltransferase
scn_reactorb_scaffold_60594_16
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

19692..20879
DNA (1188bp) protein (396aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Haloplasma contractile SSD-17B RepID=U2ECH8_9BACT
scn_reactorb_scaffold_60594_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20897..21538
DNA (642bp) protein (214aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRK4_9CLOT
Displaying 17 items

View Taxonomy