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scn_reactorb_scaffold_63334_19

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(19741..20088)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DGN6_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 169
  • Evalue 1.40e-39
Transcriptional regulator {ECO:0000313|EMBL:GAE88733.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 115.0
  • Bit_score: 171
  • Evalue 5.10e-40
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 115.0
  • Bit_score: 169
  • Evalue 3.90e-40

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 348
ATGGCTATTGATAAGGGTTTATTATCTGGAAGCACTACAACACTAATATTAAAGCTTCTCGAGGAAAAGGATATGTATGGTTATGAAATGATAGAAACTCTTTCAAAAAAATCTGACCATACCTTTGATTTAAAGGCAGGTACACTCTACCCTATTTTACATAATCTTGAAAAGGATGAATTCGTAGAGTCTTACGAAGAAAAAGCAGATAATGATAGACTTCGTAAATACTATCATTTAAGTCAAAAAGGCAAGAAATTACTGCAAGAAAAAGAAAAAGAGTGGATTAACTACTCTAATGCCGTCAATAAGGTTCTAAAAGGAGGTCTAAGCTATGCATGCATTTGA
PROTEIN sequence
Length: 116
MAIDKGLLSGSTTTLILKLLEEKDMYGYEMIETLSKKSDHTFDLKAGTLYPILHNLEKDEFVESYEEKADNDRLRKYYHLSQKGKKLLQEKEKEWINYSNAVNKVLKGGLSYACI*