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scn_reactorb_scaffold_63334

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_63334_1
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..208
DNA (207bp) protein (69aa)
Putative alkaline-shock protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPD3_9CLOT
alkaline shock protein
Putative alkaline-shock protein {ECO:0000313|EMBL:EOD00521.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_63334_2
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

233..1867
DNA (1635bp) protein (545aa)
Dihydroxyacetone kinase family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV63_9CLOT
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EOD00522.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
yloV; DAK2 domain fusion protein YloV
scn_reactorb_scaffold_63334_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1993..4068
DNA (2076bp) protein (692aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATT6_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EOD00523.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_63334_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4085..4639
DNA (555bp) protein (185aa)
RNA methyltransferase, RsmD family n=1 Tax=Parvimonas sp. oral taxon 393 str. F0440 RepID=F9PSV0_9FIRM
Methyltransferase {ECO:0000313|EMBL:KGG81129.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
RNA methyltransferase
scn_reactorb_scaffold_63334_5
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4636..5151
DNA (516bp) protein (172aa)
coaD; Phosphopantetheine adenylyltransferase CoaD (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZH0_CLOA9
scn_reactorb_scaffold_63334_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5157..5600
DNA (444bp) protein (148aa)
ATPase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CHL4_THEYO
ATPase {ECO:0000313|EMBL:ERM92405.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
NtpF; vacuolar-type H+-ATPase subunit H
scn_reactorb_scaffold_63334_7
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

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5643..6785
DNA (1143bp) protein (381aa)
Peptidase MA superfamily protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FQ21_9BACT
Peptidase MA superfamily protein {ECO:0000313|EMBL:ERJ13144.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
putative lipoprotein
scn_reactorb_scaffold_63334_8
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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6849..8012
DNA (1164bp) protein (388aa)
Exonuclease SbcD n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XF25_9FIRM
Exonuclease SbcD {ECO:0000313|EMBL:CDA14153.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
exonuclease SbcD
scn_reactorb_scaffold_63334_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8013..11243
DNA (3231bp) protein (1077aa)
Exonuclease SbcCD, C subunit n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHS1_9FIRM
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EDM62822.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SMC domain-containing protein
scn_reactorb_scaffold_63334_10
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

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11304..12065
DNA (762bp) protein (254aa)
Possible serine/threonine protein phosphatase n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CC44_9FIRM
Possible serine/threonine protein phosphatase {ECO:0000313|EMBL:CCX65500.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
scn_reactorb_scaffold_63334_11
unknown

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12165..12326
DNA (162bp) protein (54aa)

This feature has no annotations

scn_reactorb_scaffold_63334_12
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12319..13347)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E344F6
Uncharacterized protein {ECO:0000313|EMBL:EYE89294.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
ylbJ; sporulation integral membrane protein YlbJ
scn_reactorb_scaffold_63334_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13400..14662)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI000319CE27
UPF0348 protein Y919_02375 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_63334_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(14687..15121)
DNA (435bp) protein (145aa)
Putative uncharacterized protein id=3717086 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
pyridoxamine 5-phosphate oxidase
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_63334_15
unknown

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comp(15268..15528)
DNA (261bp) protein (87aa)

This feature has no annotations

scn_reactorb_scaffold_63334_16
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15518..17269)
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D7W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI92418.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
scn_reactorb_scaffold_63334_17
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17770..18279)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Treponema denticola RepID=M2BJ44_TREDN
Uncharacterized protein {ECO:0000313|EMBL:EMB25047.1}; TaxID=999437 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola SP33.;"
N-acetyltransferase GCN5
scn_reactorb_scaffold_63334_18
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18381..19754)
DNA (1374bp) protein (458aa)
Bacterial cell division membrane protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AE90_9FIRM
Cell division protein FtsW {ECO:0000313|EMBL:GAE88734.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
cell division membrane protein
scn_reactorb_scaffold_63334_19
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19741..20088)
DNA (348bp) protein (116aa)
Transcriptional regulator, PadR-like family n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DGN6_CLOTH
Transcriptional regulator {ECO:0000313|EMBL:GAE88733.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
PadR family transcriptional regulator
scn_reactorb_scaffold_63334_20
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20298..20966
DNA (669bp) protein (223aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AAL1_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCX38082.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ArsR family transcriptional regulator
scn_reactorb_scaffold_63334_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21046..22869
DNA (1824bp) protein (608aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQU5_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX43424.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_63334_22
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22862..24061
DNA (1200bp) protein (400aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQU4_CLOPH
ABC transporter related
ABC transporter related {ECO:0000313|EMBL:ABX43423.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Displaying 22 items

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