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scn_reactorb_scaffold_39895_13

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(11835..12194)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MK14_ALKOO similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 117.0
  • Bit_score: 122
  • Evalue 2.00e-25
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 117.0
  • Bit_score: 122
  • Evalue 5.70e-26
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABW20146.1}; Flags: Precursor;; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 117.0
  • Bit_score: 122
  • Evalue 2.80e-25

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Taxonomy

Alkaliphilus oremlandii → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGTACCAATCTAACCGTGATGGTAAGATATCATATGAGGTATATATAAGCGTTGTTGGAGGAGAAGGATTAAAGCCAGGCTTTAATGCTAACTGCTTTATAAGCGGCGGAGAATCTCTAAATACATTGATTATACCTATCGAAGCAGTATTTGAAGAGGAATCAAAGCAAAAGGTTGAGGTTCTAAAGGATGACGGAACAATAGAAACTGTTGAAATTGAAGTTGGACTCATGAATGATAGAGTTGTTGAGGTTTTGAGTGGATTAGAAGAAGGACAGAAGGTTGTAACTGGAAATTCCAGTGATTTAATGCCAAGTCAGTCAGTAGATAATAAAAATTCGATAATACCTAAAAAATAA
PROTEIN sequence
Length: 120
MYQSNRDGKISYEVYISVVGGEGLKPGFNANCFISGGESLNTLIIPIEAVFEEESKQKVEVLKDDGTIETVEIEVGLMNDRVVEVLSGLEEGQKVVTGNSSDLMPSQSVDNKNSIIPKK*