ggKbase home page

scn_reactorb_scaffold_39895_20

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(20232..21662)

Top 3 Functional Annotations

Value Algorithm Source
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 455.0
  • Bit_score: 579
  • Evalue 3.40e-162
selA; selenocysteine synthase SelA (EC:2.9.1.1) similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 451.0
  • Bit_score: 500
  • Evalue 3.10e-139
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037A79B5 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 454.0
  • Bit_score: 587
  • Evalue 8.90e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sordellii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGATAAAAATGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTATTGATTGAAGATGAAGAAATAAAAGAACTAATTGATAATAATGACAGAGAGCTTGTTGTTGATGTAATAAGAGAAAAAACAGAGGAGCTTAGAAACTTCATTTTAACAAGCGATTCAAGCGTTTCAGAAGATGAAATATCTCAAAAAATTGACAATTTAATTGAGGATATTTCGTTAAAGGTAAGAAAAATAACAAAACTTAATATGAGAAAAGTCATAAATGCGACAGGAACTATACTCCACACAAATCTGGGAAGAGCTGTTATATCTGAAAAAATTGCTGATAGATTAAAGGAGATAGTTACAGGCTATTCTAATCTCGAATATGATATCGAGGCTGGCGACAGAGGCGAGAGATATTCGCATTTTGAGGATATTGTATGCAGAATAACTGGTGCTGAATCTGCTATGGCTGTAAACAACAATGCAGCTGCGGTTATGCTTATTTTAAGCACTATTGCGAAGGACAAAGAGGTAGTAGTATCAAGAGGAGAGCTTGTTGAAATTGGGGGCTCATTTAGGGTTCCTGATGTAATGATACAAAGCGGCTCTAAATTAGTTGAAATTGGAACAACAAATAAAACTCATCTAAGAGATTATGAAAATGCTATTAATGAAGAGACTAAGGCAATTTTAAAGGTACATACAAGCAATTATAAAATAGTTGGGTTTACAGATGATGTTTCTATAAAAGAGCTTTCAGCTCTTAGTCAAAAGCATAATATTCCGCTTATAGAGGATATCGGAAGCGGGGTTTTAATTGATTTGAGCAAATATGGACTAAGCTACGAGCCGACTGTTCAGGAATCAATAAAAAATGGTGCAGATGTTGTTTGTTTTAGCGGTGATAAGCTTTTAGGCGGACCACAGGCAGGAATAATTGTTGGTAAAAAGAAATATATTGACAAAATGAAAAAAAATCCACTGACAAGAGCAATAAGGATAGATAAATTCACAGCAACAGCTTTAGAGGCAGTATTCCACGAGTATATCAACGAAGAAAATGCTATAAAAAATATACCTGTGCTTAGAATGATTACAGAAGATATCAAAGAGCTTCAGGCACACGCTGACTATTTATATTATAAAATCAAGGATATACATGAGCTTGCTGAAATAAATATTGAGGATTGCTTCTCGCAGGTTGGAGGAGGCTCGCTTCCATTAGAGAGAATTAAGAGCAAATGTATTTCAATAAAGCCTAATAATATTACCACAGCATTATTTGAAAAAAAATTGAGAAAATTTGATGTCATAGTAAGAATTTCTGATGATAAGGCAATTTTTGATATGAGAACTATAAAAAAATCTGAATTAGACATACTTGCAAATAGCATTGTTGGGACTTTATTATTTGCATAG
PROTEIN sequence
Length: 477
MDKNAXXXXXXXXXXXXXXXXDLLIEDEEIKELIDNNDRELVVDVIREKTEELRNFILTSDSSVSEDEISQKIDNLIEDISLKVRKITKLNMRKVINATGTILHTNLGRAVISEKIADRLKEIVTGYSNLEYDIEAGDRGERYSHFEDIVCRITGAESAMAVNNNAAAVMLILSTIAKDKEVVVSRGELVEIGGSFRVPDVMIQSGSKLVEIGTTNKTHLRDYENAINEETKAILKVHTSNYKIVGFTDDVSIKELSALSQKHNIPLIEDIGSGVLIDLSKYGLSYEPTVQESIKNGADVVCFSGDKLLGGPQAGIIVGKKKYIDKMKKNPLTRAIRIDKFTATALEAVFHEYINEENAIKNIPVLRMITEDIKELQAHADYLYYKIKDIHELAEINIEDCFSQVGGGSLPLERIKSKCISIKPNNITTALFEKKLRKFDVIVRISDDKAIFDMRTIKKSELDILANSIVGTLLFA*