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scn_reactorb_scaffold_36517_1

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 2..598

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV33_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 290
  • Evalue 9.30e-76
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 198.0
  • Bit_score: 290
  • Evalue 1.30e-75
rpsD2; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 198.0
  • Bit_score: 285
  • Evalue 8.50e-75

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 597
AGACTTTGCAGAAGAGAAGGACTTAAATTGTACTTAAAGGGTGACAGATGTTACACTGATAAGTGCTCTATTGGTAGAAGAAATTCTGCTCCTGGTCAGCATGGACAAAATAAAAAGAAGCTTACTAACCACGGTATACAATTAAGAGAAAAACAAAAAGTTAAGAGATATTATGGTATATTAGAAGGACAATTTGCTGAATACTTCAATATTGCTAATAAAATGCAAGGAGTAACAGGTACTAACCTATTATCTATATTAGAGCAAAGATTTGACAATATTGTTTACAGATTAGGTTTCGCTGCTTCAAGAGCTGAAGCAAGACAATTAGTAGTACATGGACATTTTACACTCAATGGTAAAAAAGCCGACGTACCTTCTATGATTCTTAAAGTAGGCGATGAAATAGCTGTTAAAGAGGCAAGCAGAAGTTTACCTAAGTTCAAATCCATAATTGAAAACCATAAAATTACAGTAGCTCAATGGTTACAAGTAGAGCCAGATAATTTTACTGGAAGGATAATAGCTATACCTACTAAAGCAGATATAGAATTACCAATTGAAGAGCATCTAATTGTTGAGTGGTACTCTAAATAA
PROTEIN sequence
Length: 199
RLCRREGLKLYLKGDRCYTDKCSIGRRNSAPGQHGQNKKKLTNHGIQLREKQKVKRYYGILEGQFAEYFNIANKMQGVTGTNLLSILEQRFDNIVYRLGFAASRAEARQLVVHGHFTLNGKKADVPSMILKVGDEIAVKEASRSLPKFKSIIENHKITVAQWLQVEPDNFTGRIIAIPTKADIELPIEEHLIVEWYSK*