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scn_reactorb_scaffold_36517_2

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 658..1122

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 154.0
  • Bit_score: 227
  • Evalue 8.10e-57
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 154.0
  • Bit_score: 218
  • Evalue 7.60e-55
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWN6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 154.0
  • Bit_score: 227
  • Evalue 5.80e-57

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGATCGAAATTGAAAAACCTAATATTACCTTAATTGATAAAAATGATAAAAACACATATGGCAAGATAGTTCTTGAGCCATTAGAAAGAGGATACGGAACAACTTTAGGGAATTCATTAAGAAGAATACTTCTTTCATCGTTACCTGGTGCTGCTGTTACATCAATCAATATTCAAGGTGTGTTGCATGAATTTTCTACCATACCAGGGGTAAGAGAAGATGTTTCAGAGATAATTCTTAACATTAAAAATATCGCTGCTATAAAGCGTGTTAATGAACCCGTTCAATTATTAATTGATGCAAAGGGTCCAAAGGTGGTTACAGCTGCTGATATAATTACTGGTGTTGATGTAGAAATTGTAAACGAAGATTTACATATTGCTACTCTTGAGGAAGGTGCAGAGCTTATTATCGAGATGGAAATGGAATCAGGTCGTGGCTATGTAGTTTCTGAAAGAAATTAG
PROTEIN sequence
Length: 155
MIEIEKPNITLIDKNDKNTYGKIVLEPLERGYGTTLGNSLRRILLSSLPGAAVTSINIQGVLHEFSTIPGVREDVSEIILNIKNIAAIKRVNEPVQLLIDAKGPKVVTAADIITGVDVEIVNEDLHIATLEEGAELIIEMEMESGRGYVVSERN*