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scn_reactorb_scaffold_36517_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 1237..1605

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 122.0
  • Bit_score: 194
  • Evalue 4.60e-47
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWN6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 122.0
  • Bit_score: 194
  • Evalue 3.30e-47
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 121.0
  • Bit_score: 190
  • Evalue 2.30e-46

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 369
TTGACGCTTGAAGTTTGGACTAATGGTACGACTGAACCTGTTGAAGCCGTAGCATTGGGAGCTAAAATATTAAACGAGCATCTTAACCTATTCATAGCATTGACTGAACGTGTTAACGAAGTTGAGATAATGGTTGAAAAAGAAGAAGATGTTAAAGAAAAAGTCTTAGAAATGACAATTGAGGAACTTGATTTATCGGTTAGATCTTACAACTGTCTAAAGAGAGCAGGTATAAATTCTGTTGAAGAGCTTACTTACAAGTCTGATGAAGACATGATGAAGGTAAGAAATCTTGGTAAGAAATCTTTAGATGAGGTTCAGAAGAAACTGGAAGAATTAGGTTTATCTTTAAGGAAAAACGAAAATTAG
PROTEIN sequence
Length: 123
LTLEVWTNGTTEPVEAVALGAKILNEHLNLFIALTERVNEVEIMVEKEEDVKEKVLEMTIEELDLSVRSYNCLKRAGINSVEELTYKSDEDMMKVRNLGKKSLDEVQKKLEELGLSLRKNEN*