ggKbase home page

scn_reactorb_scaffold_55730_13

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(8959..9495)

Top 3 Functional Annotations

Value Algorithm Source
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 158.0
  • Bit_score: 242
  • Evalue 2.80e-61
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21) similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 160.0
  • Bit_score: 241
  • Evalue 1.60e-61
S-ribosylhomocysteine lyase n=3 Tax=Clostridium carboxidivorans P7 RepID=D6MHY2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 159.0
  • Bit_score: 242
  • Evalue 2.00e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Turicibacter sanguinis → Turicibacter → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTTATAATATTTAAAGTTCAAAGCATCTTAAAACTATTGGAGGAATGGGAAGTCATGAAAAAAATTGAAAGCTTTCAGGTTAATCACTTAAATCTAAAAAGAGGAATATATGTATCAAGAAAGGACTTAGTTGGAGACCAGTCCCTTACAACCTTTGATATAAGAACAAAAGAGCCAAATAAAGAGCCGGTTATGAACACTGCTGAAATCCATACTATCGAGCATTTAGCAGCGACTTTTTTAAGGAATCATAGCATTTATAATGAAAAAACTGTGTATTTCGGACCAATGGGCTGTAGGACAGGCTTCTATGTGATATTTAAGGGTGATTTAAAATCAGAAGACATCATTGATATAATGCGTGAAATGTTTGAGTTTATAGCCAATTATGAAGGTGAAGTCCCAGGAGCTGACGCAAAATCCTGCGGAAATTATTTAGATATGAATCTGCCAATGGCTAAATATGAAGCAAAATTGTTTTTAAGTGAAGTTTTATTAAATATTAGCGAGGAAAATATGCGTTATCCTGAATAA
PROTEIN sequence
Length: 179
MLIIFKVQSILKLLEEWEVMKKIESFQVNHLNLKRGIYVSRKDLVGDQSLTTFDIRTKEPNKEPVMNTAEIHTIEHLAATFLRNHSIYNEKTVYFGPMGCRTGFYVIFKGDLKSEDIIDIMREMFEFIANYEGEVPGADAKSCGNYLDMNLPMAKYEAKLFLSEVLLNISEENMRYPE*