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scn_reactorb_scaffold_56466_6

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 6601..7233

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 209.0
  • Bit_score: 261
  • Evalue 5.30e-67
nth; endonuclease III (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 207.0
  • Bit_score: 248
  • Evalue 9.30e-64
Endonuclease III n=1 Tax=Clostridium intestinale URNW RepID=U2NKF9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 209.0
  • Bit_score: 261
  • Evalue 3.80e-67

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Taxonomy

Clostridium intestinale → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 633
ATGAATAAAGCAAAAGAAATATATTTTAGATTAAAAGAGGAGTATCCTGATGCGAAGTGTGCGCTTGATTACCAAACACCATTTCAGCTGCTTGTTTCAACTGTTTTAAGCGCTCAAGCTACGGATAAAAGTGTTAATGCGGTCACTGAAATACTATACAAGGAATATGGTGATTTAGAAGCCTTTTCCAAGTTAAGTATGCAAGAGATCGAAGAAAAAATTAAAAAAATAGGATTGTATAAGAACAAAGCCAAGAGCATATACAATCTATGCAGGGAGCTAAAAGAGCTGTATGATGGCGAAGTTCCTCAAACAATGGACGAGCTTATAGTATTATCGGGAGTAGGAAGGAAAACAGCGAGCGTAGTATTGGCAGAGGCATTTAAAATTCCTGCATTTCCAGTAGATACTCATGTATTTAGAGTAAGCCGCAAATTGGGGATTGCAAAAGCATCAACAGCAGATAAGGTAGCCGGTGAGCTGATGAAAAAGCTTCCTAAAAAATATTGGATAGAATCTCATCATCTTTTTATAACCCACGGCAGAAGAGTGTGCTCAGCGAGAAGTCCAAAGTGTGATGAATGTGTTTTAAGTGATTTATGCGAATATAAAATAAAACAAGGGAAGGAATAA
PROTEIN sequence
Length: 211
MNKAKEIYFRLKEEYPDAKCALDYQTPFQLLVSTVLSAQATDKSVNAVTEILYKEYGDLEAFSKLSMQEIEEKIKKIGLYKNKAKSIYNLCRELKELYDGEVPQTMDELIVLSGVGRKTASVVLAEAFKIPAFPVDTHVFRVSRKLGIAKASTADKVAGELMKKLPKKYWIESHHLFITHGRRVCSARSPKCDECVLSDLCEYKIKQGKE*