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scn_reactorb_scaffold_84059_13

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(12781..13695)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 286.0
  • Bit_score: 275
  • Evalue 5.10e-71
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2) similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 292.0
  • Bit_score: 266
  • Evalue 8.20e-69
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D34FB0 similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 299.0
  • Bit_score: 314
  • Evalue 9.20e-83

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Taxonomy

Roseburia sp. CAG:100 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAAATAGTGAAAGCAGAACACATGGGATTTTGCTTTGGAGTTAAGAATGCTGTTGATTGTGCTATAAAATCATTAGACGAATTTGGAAAGATATACAGCTACGGGGAAATAATTCATAACAAGGACGTAGTTGAATTTTTGGCAGGTAAAGGCTTGCACGTGATTGATGATAAGGATAGCTCAAAGCTTTCAGAAGCTTCAGCAAGCAAGATAGACGGCAAAATATTAATCCGTTCACATGGTGTATCTAAAGAAATTATAGATTTTTTAGAAAAAAACAATTTTGAATATATAGACGCTACATGTCCAAAGGTTAAGAGCATACATAAAATAGTGAGCAAATATAGCTCACAGGGTTATGAAATTATAGTTATAGGAGATGCATCTCATCCAGAAATTATAGGTATAACAGGATGGATAGATGGGAAATACTATATTGCTGAAAGTATTGAAAAATTAAGACGAATTAATCTAGATAAAGGGAAAAAATACTGTTTAGTATGTCAAACAACATTTAATTATAATATTTTAAAAGAAATAGTTGAATTTTTGGAAAAAAACGATTATACTAATATAGTGATTAATAATACAATTTGCGATGCGACATTGAAAAGACAAAAATCTTGTTATGAATTAGCTGGAAAGTGTGATATAATGCTTGTTATAGGCGGAAAAAACAGCTCAAACACTAAAAAGCTTTATGAAATGTGCAAAGAAAAATGTAAAAAAACATTTTTAATTGAAAATTATAAGGAAATACCTTATAAATATATTGATAAAAATACAAGGATAGGGATAACTGCAGGAGCATCAACTCCTGACTGGGTTATCGAGGAGGTTATACGAAATGTCAGAGAATCAGAACAAAACAATGAATGAGTTAATGGAAGATTATGGTGTTCTAAAAATTAG
PROTEIN sequence
Length: 305
MEIVKAEHMGFCFGVKNAVDCAIKSLDEFGKIYSYGEIIHNKDVVEFLAGKGLHVIDDKDSSKLSEASASKIDGKILIRSHGVSKEIIDFLEKNNFEYIDATCPKVKSIHKIVSKYSSQGYEIIVIGDASHPEIIGITGWIDGKYYIAESIEKLRRINLDKGKKYCLVCQTTFNYNILKEIVEFLEKNDYTNIVINNTICDATLKRQKSCYELAGKCDIMLVIGGKNSSNTKKLYEMCKEKCKKTFLIENYKEIPYKYIDKNTRIGITAGASTPDWVIEEVIRNVRESEQNNE*VNGRLWCSKN*