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scn_reactorb_scaffold_84059

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_84059_1
unknown

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comp(2..100)
DNA (99bp) protein (33aa)

This feature has no annotations

scn_reactorb_scaffold_84059_2
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(182..1342)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AWK5_SYNWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI68899.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
scn_reactorb_scaffold_84059_3
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1429..2184)
DNA (756bp) protein (252aa)
Zinc/iron permease n=7 Tax=Clostridium thermocellum RepID=A3DK33_CLOTH
Metal transporter {ECO:0000313|EMBL:GAE87954.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
zinc/iron permease
scn_reactorb_scaffold_84059_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2425..3324)
DNA (900bp) protein (300aa)
Inner-membrane translocator n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSG8_CLOPH
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABX43620.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_84059_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3326..4438)
DNA (1113bp) protein (371aa)
Inner-membrane translocator n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSG9_CLOPH
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABX43621.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_84059_6
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4419..5984)
DNA (1566bp) protein (522aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSH0_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX43622.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_84059_7
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6132..7280)
DNA (1149bp) protein (383aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WIT0_DESOD
ABC-type transport system, periplasmic component/surface lipoprotein
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:AET69154.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
scn_reactorb_scaffold_84059_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(7419..8117)
DNA (699bp) protein (233aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HPI8_9FUSO
scn_reactorb_scaffold_84059_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8257..8856)
DNA (600bp) protein (200aa)
aminopeptidase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FA7CDE
Aminopeptidase {ECO:0000313|EMBL:KJF28847.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
peptidase M42 family protein
scn_reactorb_scaffold_84059_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9262..10266)
DNA (1005bp) protein (335aa)
aminopeptidase n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030FE089
peptidase family protein
Peptidase family protein {ECO:0000313|EMBL:AEV68299.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
scn_reactorb_scaffold_84059_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10257..11306)
DNA (1050bp) protein (350aa)
Putative enzyme {ECO:0000313|EMBL:CCQ92680.1}; EC=3.4.11.- {ECO:0000313|EMBL:CCQ92680.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
peptidase M42 n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D91F5C
peptidase M42 family protein
scn_reactorb_scaffold_84059_12
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11400..12821)
DNA (1422bp) protein (474aa)
putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D34FB0
scn_reactorb_scaffold_84059_13
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12781..13695)
DNA (915bp) protein (305aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) (EC:1.17.1.2)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D34FB0
scn_reactorb_scaffold_84059_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13763..14353)
DNA (591bp) protein (197aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EOD01640.1}; EC=2.3.1.51 {ECO:0000313|EMBL:EOD01640.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI000311DAC4
1-acyl-sn-glycerol-3-phosphate acyltransferase
scn_reactorb_scaffold_84059_15
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14373..14750)
DNA (378bp) protein (126aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QFW9_9FIRM
Chorismate mutase {ECO:0000313|EMBL:CDC20822.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
scn_reactorb_scaffold_84059_16
unknown

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comp(14937..16307)
DNA (1371bp) protein (457aa)

This feature has no annotations

scn_reactorb_scaffold_84059_17
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16538..17176)
DNA (639bp) protein (213aa)
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
cytidylate kinase n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031A8792
scn_reactorb_scaffold_84059_18
unknown

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comp(17258..18640)
DNA (1383bp) protein (461aa)

This feature has no annotations

scn_reactorb_scaffold_84059_19
unknown

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comp(18802..20241)
DNA (1440bp) protein (480aa)

This feature has no annotations

scn_reactorb_scaffold_84059_20
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20406..21278)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI000311B48D
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EOD01098.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
RpiR family transcriptional regulator
scn_reactorb_scaffold_84059_21
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21374..21922)
DNA (549bp) protein (183aa)
korC; 2-oxoglutarate synthase subunit korC (2-ketoglutarate oxidoreductase gamma chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit gamma) (EC:1.2.7.3)
2-oxoglutarate synthase subunit korC (2-ketoglutarate oxidoreductase gamma chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit gamma) {ECO:0000313|EMBL:CBH21591.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBH21591.1};; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DA5398
scn_reactorb_scaffold_84059_22
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21936..22757)
DNA (822bp) protein (274aa)
2-oxoglutarate oxidoreductase, beta subunit {ECO:0000313|EMBL:EOD01096.1}; EC=1.2.7.3 {ECO:0000313|EMBL:EOD01096.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D2B0AE
2-oxoglutarate ferredoxin oxidoreductase subunit beta
scn_reactorb_scaffold_84059_23
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22757..23908)
DNA (1152bp) protein (384aa)
2-oxoglutarate synthase subunit korA {ECO:0000313|EMBL:CCQ92668.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CCQ92668.1};; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EB81C7
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
scn_reactorb_scaffold_84059_24
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23901..24107)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EF6F43
Uncharacterized protein {ECO:0000313|EMBL:KGG79444.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Ferredoxin
scn_reactorb_scaffold_84059_25
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24426..24998)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030C5D6D
Putative rRNA methylase {ECO:0000313|EMBL:EDS72719.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
rRNA methylase
scn_reactorb_scaffold_84059_26
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25085..25240)
DNA (156bp) protein (52aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
rluB; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSE6_9CLOT
Displaying 26 items

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