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scn_reactorb_scaffold_115259_13

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(7339..8283)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 308.0
  • Bit_score: 342
  • Evalue 4.60e-91
miaA; tRNA Delta(2)-isopentenylpyrophosphate transferase MiaA (EC:2.5.1.75) similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 310.0
  • Bit_score: 335
  • Evalue 1.50e-89
tRNA dimethylallyltransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FC923F similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 305.0
  • Bit_score: 410
  • Evalue 9.80e-112

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Taxonomy

Clostridium bartlettii CAG:1329 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 945
GTGAAAAAAATATTAGTTATAGTAGGTCCAACTGCTGTTGGGAAAACCTACGTATCTATTGAGCTTGCAAAGAAATTTAATACTGAAATCATATCTGCTGATTCAATGCAGGTGTATAAATATATGGATATTGGCACTGCAAAGGTTACAGAGCAAGAAGCCTGCGGCATAAAGCACCATATGATTGACCTTATTGAGCCGGACGAAGAATTTTCTGTTTCTGAATTTCAAAAAATGGCAGAAAGACACATTGAAGAAATTCATGATAAGGGAAAGCTGCCAATAATCATTGGTGGAAGTGGTCTTTATCTTAATTCTTTGCTTTATGACTTGGATTTTGGGACAGTAAAATCTGATGAAAAAGTGAAAAAATACTATACTGATTATTATAAAGAGCATGGTACAGATAAGCTTTACGAGCTTTTAATAAACGCAGATTCGAAGGCGTGCGATAAAATACATAAAAATAATGTAAAAAGGGTAATCAGAGCGTTAGAGGTATGTCATATAACAGGTAAAAAATTCTCTGATATGAGTACAGATATAAGAAAACCAAGCAGCAAGTACGATTATAAAATAATAGGGCTTGAAATGGAAAGAGATATTTTATATCAAAGAATTAATAAGCGAGTAGATTTAATGCTTGAAAATGGTCTTATAGATGAAGTAAAAGCATTGATAGATAAGGGCTATACTAAGAATCTAAGCTCTATGCGAGGGATTGGATATAAAGAAATTGTAGATTATTTAGATGGCAGTATGTCAAAGGAAGAGGCCATAGAAGTTTTAAAAACAAACACAAGAAGATTTGCAAAGAGACAGTTTACTTGGTTTAAAGCAGATAAGAATATACAGTGGTTTGATTTGACAAATATAAGTGATATTGATTTAGTAGTAGAAAAAATATTTAATAACATTACAAATACAGAAAATAAGTTTTGCTAG
PROTEIN sequence
Length: 315
VKKILVIVGPTAVGKTYVSIELAKKFNTEIISADSMQVYKYMDIGTAKVTEQEACGIKHHMIDLIEPDEEFSVSEFQKMAERHIEEIHDKGKLPIIIGGSGLYLNSLLYDLDFGTVKSDEKVKKYYTDYYKEHGTDKLYELLINADSKACDKIHKNNVKRVIRALEVCHITGKKFSDMSTDIRKPSSKYDYKIIGLEMERDILYQRINKRVDLMLENGLIDEVKALIDKGYTKNLSSMRGIGYKEIVDYLDGSMSKEEAIEVLKTNTRRFAKRQFTWFKADKNIQWFDLTNISDIDLVVEKIFNNITNTENKFC*