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scn_reactorb_scaffold_115259

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_115259_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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200..760
DNA (561bp) protein (187aa)
Phosphoglycerate mutase family protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DE22_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ERI95035.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
Phosphoglycerate mutase family protein
scn_reactorb_scaffold_115259_2
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(919..1224)
DNA (306bp) protein (102aa)
Peptidoglycan-binding LysM n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I2Q0_CLOCE
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:ACL76043.1}; Flags: Precursor;; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
scn_reactorb_scaffold_115259_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1482..2120
DNA (639bp) protein (213aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
LexA repressor (EC:3.4.21.88)
XRE family transcriptional regulator n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DAD8C1
scn_reactorb_scaffold_115259_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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2227..2556
DNA (330bp) protein (110aa)
Mg2 transporter protein CorA family protein id=3191382 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative magnesium and cobalt transporter
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_115259_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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2498..2998
DNA (501bp) protein (167aa)
Mg2 transporter protein CorA family protein id=3191382 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Mg2+ transporter protein, CorA family protein
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_115259_6
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3157..3564)
DNA (408bp) protein (136aa)
Emp24/gp25L/p24 domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TAL6_9CLOT
Emp24/gp25L/p24 domain protein {ECO:0000313|EMBL:EGD48559.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
scn_reactorb_scaffold_115259_7
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3557..4165)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B1QBW2_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KAJ49613.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
scn_reactorb_scaffold_115259_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4146..4487)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRU5_9FIRM
PadR family transcriptional regulator {ECO:0000313|EMBL:KAJ52455.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
transcriptional regulator, PadR family
scn_reactorb_scaffold_115259_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4607..5518)
DNA (912bp) protein (304aa)
PfkB domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M951_9CLOT
PfkB domain protein {ECO:0000313|EMBL:EHJ01768.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PfkB domain-containing protein
scn_reactorb_scaffold_115259_10
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5614..6117)
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family n=3 Tax=Firmicutes RepID=E4LUX5_9CLOT
acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDM70032.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
scn_reactorb_scaffold_115259_11
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6114..6635)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E74554
Uncharacterized protein {ECO:0000313|EMBL:CCQ93088.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
cystathionine beta-lyase family protein involved in aluminum resistance
scn_reactorb_scaffold_115259_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6719..7252)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E74554
Uncharacterized protein {ECO:0000313|EMBL:KGG80268.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
aluminum resistance protein
scn_reactorb_scaffold_115259_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7339..8283)
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
miaA; tRNA Delta(2)-isopentenylpyrophosphate transferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FC923F
scn_reactorb_scaffold_115259_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8283..10238)
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002ED5000
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
mutL; DNA mismatch repair protein MutL
scn_reactorb_scaffold_115259_15
unknown

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10385..10528
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 15 items

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