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scn_reactorb_scaffold_131474_5

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2996..3655)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q2M5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 167.0
  • Bit_score: 213
  • Evalue 2.10e-52
Shikimate kinase {ECO:0000313|EMBL:CCZ20584.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 167.0
  • Bit_score: 213
  • Evalue 2.90e-52

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Taxonomy

Ruminococcus sp. CAG:724 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 660
ATGATTATTGCAGATAATATCATCAAAGACAAAATTAAAAATGTATATTTCATTTGGGGTAGAGGTAAGACTACAATAGCAAATGAATTAAATAAGCAATTTGGTTACTATATTTATGATGTAGACGATAGCAGAAGCAGGCATAAGAAATCATCTAGTTTCGAATACCAGCCTAATATGTGTCGTGATTTTATTAAAGAATATGGTGTTAAAAGTTTTTGGGCATTGCCGCCGGAAGTAATTAATGAGAGCGAAAAACATCTGCTGCGTGAATTTACTCCTATGGTTATTATGGATTTAATTTTACTTGCTCCTGAACATGATGTAATTATTTGTGAAGGTGATCTTGATTATGAAACCGTCATCCCTATTGCTTCTCATATAGTTCACCTTTCTAATTGCAGCACAAAATTTGATTGGTTCAATCGTCCGGATCATATAGATATGCTTGATTCTATAAAAAATCGTACTGATTTAACTGAAAAAGAGAAAGAGGATATTATCAAAAATGCATATGACTGTGTTGGACAAAACGAAGGAGAAATTCCTGACTGGCTTATAAAATATGGAGTAAAAAATATTGAGTGGAATGATAGTACAAGTATTGAACAGACAACTTTAGAGGTAGCACAATATTTTAAATTTCCATATGCTCAATAA
PROTEIN sequence
Length: 220
MIIADNIIKDKIKNVYFIWGRGKTTIANELNKQFGYYIYDVDDSRSRHKKSSSFEYQPNMCRDFIKEYGVKSFWALPPEVINESEKHLLREFTPMVIMDLILLAPEHDVIICEGDLDYETVIPIASHIVHLSNCSTKFDWFNRPDHIDMLDSIKNRTDLTEKEKEDIIKNAYDCVGQNEGEIPDWLIKYGVKNIEWNDSTSIEQTTLEVAQYFKFPYAQ*