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scn_reactorb_scaffold_131474

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_131474_1
Thermoanaerobacterium aotearoense, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
DNA protecting protein DprA n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EF70B4
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:ETO38603.1}; TaxID=1421016 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium aotearoense SCUT27.;"
scn_reactorb_scaffold_131474_2
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(327..1850)
DNA (1524bp) protein (508aa)
Fis family transcriptional regulator n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031A459C
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein {ECO:0000313|EMBL:EOC99316.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Mg chelatase subunit ChlI
scn_reactorb_scaffold_131474_3
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1970..2320)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031F5BDD
hypothetical protein
UPF0102 protein Apre_1291 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
scn_reactorb_scaffold_131474_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2330..2962)
DNA (633bp) protein (211aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
ribonuclease HII n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FBAE02
scn_reactorb_scaffold_131474_5
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2996..3655)
DNA (660bp) protein (220aa)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q2M5_9FIRM
Shikimate kinase {ECO:0000313|EMBL:CCZ20584.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
scn_reactorb_scaffold_131474_6
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3906..4775)
DNA (870bp) protein (290aa)
GTPase YlqF n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030B8D9B
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
rbgA; ribosome biogenesis GTPase A
scn_reactorb_scaffold_131474_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4811..5137)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50307.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
scn_reactorb_scaffold_131474_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5230..5577)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031B2A3B
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
rplS; 50S ribosomal protein L19
scn_reactorb_scaffold_131474_9
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5847..7883)
DNA (2037bp) protein (679aa)
hypothetical protein n=1 Tax=Bacillus acidiproducens RepID=UPI00036ED7AA
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:EGW39702.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
ATPase AAA
scn_reactorb_scaffold_131474_10
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7898..8362)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XVH5_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ89911.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
hypothetical protein
scn_reactorb_scaffold_131474_11
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8359..8703)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00036F799B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL19838.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
scn_reactorb_scaffold_131474_12
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

comp(8914..9480)
DNA (567bp) protein (189aa)
NADPH-dependent FMN reductase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E9K4_9BACT
NADPH-dependent FMN reductase protein {ECO:0000313|EMBL:ERJ11511.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
NADPH-dependent FMN reductase
scn_reactorb_scaffold_131474_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9592..10242)
DNA (651bp) protein (217aa)
VanZ-like protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A896_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EDQ97103.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
VanZ family protein
scn_reactorb_scaffold_131474_14
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(10249..10428)
DNA (180bp) protein (60aa)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9WFY2_9CLOT
tRNA-(guanine-N1)-methyltransferase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
scn_reactorb_scaffold_131474_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11070..11570)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0003120525
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
rimM; 16S rRNA processing protein RimM
scn_reactorb_scaffold_131474_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11895..12125)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002F85E8C
UPF0109 protein Y919_04490 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_131474_17
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12248..12517)
DNA (270bp) protein (90aa)
30S ribosomal protein S16 n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D9826D
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
rpsP; 30S ribosomal protein S16
scn_reactorb_scaffold_131474_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12609..13952)
DNA (1344bp) protein (448aa)
signal recognition particle protein Srp54 n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D29BFF
ffh; signal recognition particle protein Ffh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_131474_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13965..14363)
DNA (399bp) protein (133aa)
signal peptide protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002DD3FE4
putative helix-turn-helix protein YlxM/p13 family protein
UPF0122 protein Clos_1462 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
scn_reactorb_scaffold_131474_20
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14673..15461)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003139D25
Uncharacterized protein {ECO:0000313|EMBL:EQB86425.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter
scn_reactorb_scaffold_131474_21
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15461..16384)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MUT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86424.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter
scn_reactorb_scaffold_131474_22
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16781..17254)
DNA (474bp) protein (158aa)
Phosphohydrolase (MUTT/NUDIX family protein) n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9SZ99_PAEAL
Phosphohydrolase (MUTT/NUDIX family protein) {ECO:0000313|EMBL:EPY11162.1}; TaxID=1117109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei A6-6i-x.;"
phosphohydrolase
scn_reactorb_scaffold_131474_23
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17434..18066)
DNA (633bp) protein (211aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
3-methyladenine DNA glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase n=2 Tax=Desulfitobacterium hafniense RepID=B8FPH1_DESHD
scn_reactorb_scaffold_131474_24
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18050..18295)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KR07_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43486.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_131474_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18355..19101)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SZ22_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95180.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
scn_reactorb_scaffold_131474_26
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(19124..19564)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPC0_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES62996.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
scn_reactorb_scaffold_131474_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19587..20054)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum C str. Stockholm RepID=F7MLH7_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EGO88339.1}; TaxID=929505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C str. Stockholm.;"
hypothetical protein
scn_reactorb_scaffold_131474_28
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20122..21159)
DNA (1038bp) protein (346aa)
5-methylcytosine restriction system component-like protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DQ62_9FIRM
Putative restriction enzyme modulator protein {ECO:0000313|EMBL:CCC58147.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
5-methylcytosine-specific restriction enzyme McrBC subunit McrC
scn_reactorb_scaffold_131474_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21146..23653)
DNA (2508bp) protein (836aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DQ61_9FIRM
GTPase subunit of restriction endonuclease
GTPase subunit of restriction endonuclease {ECO:0000313|EMBL:CBK93675.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
scn_reactorb_scaffold_131474_30
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23687..24262)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TVZ6_BRELA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG26834.1}; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG 15441.;"
Displaying items 1-30 of 37 in total

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