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scn_reactorb_scaffold_86923_16

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 11217..12041

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NEG1_CLOSV similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 269.0
  • Bit_score: 274
  • Evalue 7.30e-71
ABC transporter, permease protein {ECO:0000313|EMBL:EDS07179.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 269.0
  • Bit_score: 274
  • Evalue 1.00e-70
dipeptide/oligopeptide/nickel ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 261.0
  • Bit_score: 273
  • Evalue 3.50e-71

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Taxonomy

[Clostridium] scindens → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 825
ATGAAAGTTTTTAAAAATAAGAATTTTTTAATAGGATTTATTTTTACGGCAATTCTTGCGATTATAACGCTTACAAGCTTGTTTTATACTCCTTATCCTCCGACACAAATAGATTCAAATGCACAAATGCTGCCTCCTTCCTCCGAACATCTCGGCGGAACGGACAGGCTGGGAAGAGATATGCTGTCAAGAACTATGGCAGCAGGACAGACAGCCTTTTCTATAGGTATCATTTCCGTAGTTAATGCAATGGTTTTAGGTGTCCTTTTGGGGCTTATTGCAGGATATTTTCAAGGACTTATAGGAAGTATAATTATGACATTTACCGATGCGTTCAAGTCTATACCAGGTCTTTTGTTCGCTATGATGATATCTGCAGTTTTTGGAAAAAGCTTTATATCTACTACAGTAGCTATAACTATAATACTTATACCATCATTTATTAGGATTACAAGGGCAAATGTATTAAAGATTAAATCTATTGAATATATACAATGGACCTCATTGCTTGGACTAAACCCGTTTAGGGTAATGATAATTCACATTTTGCCAAATATTATATCTTCAATTATTGTAACAGCATCTATGGGCTTTGCAGATGCTGTCTTGATAGAAGCCTCACTTAGCTATTTAGGACTTGGAATTCAACCTCCTGATCCCAGCTGGGGACAAATGCTAAATGAAGGTCAAGGCTTTATAATTACAGCGCCATGGCTTGTATTACTGCCAGGAACTATGATAACATTATTGGTTTTAGGATTTAATTTGCTCGGTGATGGATTGAGTGATTTATTAGATGCAAAATCTAGCAATAGGGAGGCTTAA
PROTEIN sequence
Length: 275
MKVFKNKNFLIGFIFTAILAIITLTSLFYTPYPPTQIDSNAQMLPPSSEHLGGTDRLGRDMLSRTMAAGQTAFSIGIISVVNAMVLGVLLGLIAGYFQGLIGSIIMTFTDAFKSIPGLLFAMMISAVFGKSFISTTVAITIILIPSFIRITRANVLKIKSIEYIQWTSLLGLNPFRVMIIHILPNIISSIIVTASMGFADAVLIEASLSYLGLGIQPPDPSWGQMLNEGQGFIITAPWLVLLPGTMITLLVLGFNLLGDGLSDLLDAKSSNREA*