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scn_reactorb_scaffold_86923

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_86923_1
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..378
DNA (378bp) protein (126aa)
Putative hydrolase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0IVS2_AMPXN
hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAM46509.1}; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG; 17667 / NBRC 15112 / Ep01).;"
scn_reactorb_scaffold_86923_2
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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409..885
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B4CD2C
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDA61396.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
N-acetyltransferase GCN5
scn_reactorb_scaffold_86923_3
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1078..2049
DNA (972bp) protein (324aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KJ63_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ61613.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
scn_reactorb_scaffold_86923_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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2195..2803
DNA (609bp) protein (203aa)
Xanthosine triphosphate pyrophosphatase id=4614799 bin=GWF2_Clostridiales_38_85 species=Roseburia intestinalis genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Xanthosine triphosphate pyrophosphatase
Tax=GWF2_Clostridiales_38_85_curated
scn_reactorb_scaffold_86923_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2865..3431
DNA (567bp) protein (189aa)
Acetyltransferase (EC:2.3.1.-)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003008595
Acetyltransferase family protein {ECO:0000313|EMBL:KIE48487.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
scn_reactorb_scaffold_86923_6
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3468..3899
DNA (432bp) protein (144aa)
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:KDR96438.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
C_GCAxxG_C_C family probable redox protein id=3085951 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
scn_reactorb_scaffold_86923_7
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3907..4776
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MWI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC03200.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
scn_reactorb_scaffold_86923_8
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(4842..5192)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CYG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71564.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Coat F domain-containing protein
scn_reactorb_scaffold_86923_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5213..5389)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U724_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51014.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
scn_reactorb_scaffold_86923_10
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5691..5924
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI000313E20E
Sporulation protein {ECO:0000313|EMBL:CEO07537.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
scn_reactorb_scaffold_86923_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6061..6891
DNA (831bp) protein (277aa)
clpP2; ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00030BA1E3
Translocation-enhancing protein TepA {ECO:0000313|EMBL:EOD01239.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
scn_reactorb_scaffold_86923_12
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6986..7399)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72731.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
scn_reactorb_scaffold_86923_13
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7484..8278)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DTN1_CLOSO
Predicted membrane protein {ECO:0000313|EMBL:CEO20491.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
scn_reactorb_scaffold_86923_14
Pontibacillus litoralis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8719..10248
DNA (1530bp) protein (510aa)
Dipeptide/oligopeptide ABC transporter, substrate-binding protein n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U594_GEOTM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGX86615.1}; TaxID=1385512 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus litoralis JSM 072002.;"
family 5 extracellular solute-binding protein
scn_reactorb_scaffold_86923_15
Viridibacillus arenosi, Viridibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10264..11205
DNA (942bp) protein (314aa)
ABC transporter permease n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225B9F7
Permease of oligopeptide ABC transporter {ECO:0000313|EMBL:ETT81549.1}; TaxID=1227360 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Viridibacillus.;" source="Viridibacillus arenosi FSL R5-213.;"
dipeptide/oligopeptide/nickel ABC transporter permease
scn_reactorb_scaffold_86923_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11217..12041
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0NEG1_CLOSV
ABC transporter, permease protein {ECO:0000313|EMBL:EDS07179.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
dipeptide/oligopeptide/nickel ABC transporter permease
scn_reactorb_scaffold_86923_17
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12042..13016
DNA (975bp) protein (325aa)
Oligopeptide/dipeptide transporter, C-terminal domain protein n=1 Tax=Staphylococcus hominis VCU122 RepID=H3VKS6_STAHO
Oligopeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EUZ69540.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
scn_reactorb_scaffold_86923_18
Bacillus sp. X1(2014), Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13049..14029
DNA (981bp) protein (327aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVB5_ACEAZ
peptide ABC transporter ATPase
Peptide ABC transporter ATPase {ECO:0000313|EMBL:AIM17235.1}; TaxID=1565991 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. X1(2014).;"
scn_reactorb_scaffold_86923_19
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14249..16483
DNA (2235bp) protein (745aa)
cell division protein FtsK n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EAA7BD
Cell division protein FtsK {ECO:0000313|EMBL:EOD01241.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
ftsK; DNA translocase
scn_reactorb_scaffold_86923_20
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16484..16666
DNA (183bp) protein (61aa)
cell division protein FtsK n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EAA7BD
DNA segregation ATPase FtsK/SpoIIIE family {ECO:0000313|EMBL:CDE89944.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
ftsK; DNA translocase
scn_reactorb_scaffold_86923_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16723..18042
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
rimO; Ribosomal protein S12 methylthiotransferase (EC:2.-.-.-)
ribosomal protein S12 methylthiotransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FE892D
scn_reactorb_scaffold_86923_22
unknown

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comp(18577..18732)
DNA (156bp) protein (52aa)

This feature has no annotations

scn_reactorb_scaffold_86923_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18837..19229
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FXT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30085.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
scn_reactorb_scaffold_86923_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19365..20558
DNA (1194bp) protein (398aa)
protein RecA n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002D4D883
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
recA protein
scn_reactorb_scaffold_86923_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20941..22488
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
ribonuclease n=1 Tax=Dehalobacter sp. E1 RepID=UPI0003168E4F
phosphodiesterase
scn_reactorb_scaffold_86923_26
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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22749..23384
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2T0R2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH93844.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
TetR family transcriptional regulator
scn_reactorb_scaffold_86923_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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23513..24205
DNA (693bp) protein (231aa)
Peptidase M23 n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJN7_CELLD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADZ82079.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
scn_reactorb_scaffold_86923_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24321..24965
DNA (645bp) protein (215aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WTR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66116.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
beta-lactamase
scn_reactorb_scaffold_86923_29
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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25274..25705
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EH07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93837.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
scn_reactorb_scaffold_86923_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25836..26570
DNA (735bp) protein (245aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
purB; adenylosuccinate lyase (EC:4.3.2.2)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031E33C2
Displaying 30 items

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