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scn_reactorb_scaffold_86923_21

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 16723..18042

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 439.0
  • Bit_score: 503
  • Evalue 1.70e-139
rimO; Ribosomal protein S12 methylthiotransferase (EC:2.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 439.0
  • Bit_score: 498
  • Evalue 1.10e-138
ribosomal protein S12 methylthiotransferase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FE892D similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 440.0
  • Bit_score: 604
  • Evalue 6.50e-170

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1320
ATGAAAAAAATTTACTTACAATCACTGGGCTGCTCAAAAAATTTAGTAGATTCAGAAAATATGCTGGGCATATTAAAAAATAAAGGTTATGAAATAGTTGAGTTTGCAGATAAATCTGACTATATAATTATTAATACCTGTTCATTTATAAATGATGCAAAGGAAGAATCTATTAATTCTATAATTGAAGCAGTGGAGTTAAAAGGTGAAAATGACATAAAGGTAATCGTAACCGGCTGTCTTGCACAAAGATATAGTGAAGATTTACTAAAAGAAATACCTGAAATAGATATATTAATAGGAACCTACGAATATGAAAAAATTGACCAATTAATTGAAGAATACGAAAATAATAATAAAAAAGTAATTAATGTAGAAGTAGATGAAACACTGATTGAGGATTTGCCAAGAAATCTTTTAACACCAAAATATTATGCATTTTTAAAAATATCAGAGGGCTGCAGCAATCATTGCACCTACTGTGTTATACCAAAAATAAGAGGTAAGTACAGAAGCAGAAAATTCGAAGATATATTAAATGAGGCACAAAGCTTAGCTAAATCTGGCGTTAAGGAATTAATAGTTATTGCACAGGATACAAGTAAATATGGAACGGACTTGTATGGAGAAAGACAGCTTCATCTATTAATTAAAGAATTATCTAAAATTGATGGTATAAGTTGGATAAGAGTTCACTACTTATATCCAGAGGATTTGTATGACGAGCTTATAGAAGAGTTTAAATATAATGATAAGCTTTTAAAATACTTTGATATACCGATACAACATGTTAGCGATGATATATTAAAGCGAATGAACAGAAAGACAAGTAATGAACAAATTACAGGCTTAATAAATAAAATTAGAAAAGAAATACCGGAAGCAGTAATTAGAACATCATTGATAACTGGGTTTCCTGGCGAAACAGAGGAAGATCACGAGATACTCAAGAAGTTTTTAGTCGATTATAAGCTGGACAGAGTTGGAGTATTTAAGTATTCAAAAGAGGAAAATACACCTGCATACAATTTGAAAAATCAAATAAAGGAAGAAGTAAAAGAGTTAAGACAGGAAGAGCTGATGAAAGTCCAACAGGAAATATCTTATAATAAAAACTCTTCTAAGATAGGAAAAACTTATGATGTCATTATTGATGAAGATTCTGGAGACAATGAATATTTAGGACGTACTTACATGGATTCTCCTGAAATTGATGGTGCTGTTTTTGTAAATTCCAATAAGAAATTAAATATTGGAGAAATTTATAGGGTGGATATTGTTGATGCCTTAGAGTATGATTTAATTGGGGATATAGAATAG
PROTEIN sequence
Length: 440
MKKIYLQSLGCSKNLVDSENMLGILKNKGYEIVEFADKSDYIIINTCSFINDAKEESINSIIEAVELKGENDIKVIVTGCLAQRYSEDLLKEIPEIDILIGTYEYEKIDQLIEEYENNNKKVINVEVDETLIEDLPRNLLTPKYYAFLKISEGCSNHCTYCVIPKIRGKYRSRKFEDILNEAQSLAKSGVKELIVIAQDTSKYGTDLYGERQLHLLIKELSKIDGISWIRVHYLYPEDLYDELIEEFKYNDKLLKYFDIPIQHVSDDILKRMNRKTSNEQITGLINKIRKEIPEAVIRTSLITGFPGETEEDHEILKKFLVDYKLDRVGVFKYSKEENTPAYNLKNQIKEEVKELRQEELMKVQQEISYNKNSSKIGKTYDVIIDEDSGDNEYLGRTYMDSPEIDGAVFVNSNKKLNIGEIYRVDIVDALEYDLIGDIE*