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scn_reactorb_scaffold_135846_13

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(18011..18739)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 237.0
  • Bit_score: 303
  • Evalue 2.40e-79
rluA; ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 238.0
  • Bit_score: 294
  • Evalue 2.20e-77
Pseudouridine synthase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0R9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 237.0
  • Bit_score: 303
  • Evalue 1.70e-79

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Taxonomy

[Clostridium] hiranonis → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAATTACGAATAGATAAGCTATTGGGCAACCTTGGTTATGGAACACGCAGCCAGTTAAAAAAGGAAATAAAGACAGGCTGCTTAACTGTCAATACCAAAACAGTCAAAGATAGCTCGGTAATTGTTGACACTGATATTGACCAAATAATATATCACGGTGAAGAAATAAAATATATTGAATACATATATCTTATGATGAACAAGCCTCAGGGGGTTATTTCTGCCACTGAGGATTATCATTGTGCGAAAACAGTTATAGATCTTTTAGATGATTTTAATAAAAACTTTGAACCGTTTCCTGTAGGCAGACTGGATAAGGACACAGAAGGACTGTTGATACTTACAAATAACGGAAAACTTGCTCACAATATGCTTTCACCGAGAAAACACATTGACAAAACATATTTTGCTTATGTAGAGGGCAAACTGACAGATGTTGATATCAAAGCATTTAAAGAGGGAGTTGCATTCTTGGATGATGCTTATAAAACTATGCCGGCAAAGCTTGAAATTATTAAATCAAATGATATATCGGAGTGCAGAGTTACTATAAAGGAGGGCAAATTTCACCAAGTTAAAAGAATGTTTGAAGCAATTGGAAAAAGGGTAATATATCTAAAGAGACTGTCCATGGGACCTATATCCTTAGATGATAATTTGGAAGCTGGAGAATATAGAGAACTAAATGATATAGAAATGCAATTGATACAAGATTATTTGCAGTAA
PROTEIN sequence
Length: 243
MKLRIDKLLGNLGYGTRSQLKKEIKTGCLTVNTKTVKDSSVIVDTDIDQIIYHGEEIKYIEYIYLMMNKPQGVISATEDYHCAKTVIDLLDDFNKNFEPFPVGRLDKDTEGLLILTNNGKLAHNMLSPRKHIDKTYFAYVEGKLTDVDIKAFKEGVAFLDDAYKTMPAKLEIIKSNDISECRVTIKEGKFHQVKRMFEAIGKRVIYLKRLSMGPISLDDNLEAGEYRELNDIEMQLIQDYLQ*