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scn_reactorb_scaffold_135846

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scn_reactorb_scaffold_135846_1
unknown

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2..571
DNA (570bp) protein (190aa)

This feature has no annotations

scn_reactorb_scaffold_135846_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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740..3523
DNA (2784bp) protein (928aa)
S-layer domain-containing protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MHP6_9FIRM
S-layer domain-containing protein {ECO:0000313|EMBL:CDB93826.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
middle cell wall protein
scn_reactorb_scaffold_135846_3
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3677..4987)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUW1_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20441.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
scn_reactorb_scaffold_135846_4
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5160..7667
DNA (2508bp) protein (836aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZKN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95747.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
S-layer protein
scn_reactorb_scaffold_135846_5
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7760..10225)
DNA (2466bp) protein (822aa)
S-layer domain-containing protein id=2064407 bin=GWE2_Clostridiales_32_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
Middle cell wall protein {ECO:0000313|EMBL:KDR96170.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
S-layer protein
scn_reactorb_scaffold_135846_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(10443..12275)
DNA (1833bp) protein (611aa)
Possible deacetylase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IST4_9FIRM
Possible deacetylase {ECO:0000313|EMBL:CCY39887.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
haemin storage system lipoprotein HmsF
scn_reactorb_scaffold_135846_7
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12285..13751)
DNA (1467bp) protein (489aa)
Membrane-bound O-acyltransferase family MBOAT n=1 Tax=Peptoniphilus sp. BV3AC2 RepID=U7V0C1_9FIRM
Membrane-bound O-acyltransferase family MBOAT {ECO:0000313|EMBL:ERT65025.1}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
membrane bound O-acyl transferase, MBOAT family protein
scn_reactorb_scaffold_135846_8
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13754..13990)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B447B3
Putative D-alanine--poly(Phosphoribitol) ligase, subunit 2 {ECO:0000313|EMBL:ERT64896.1}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2.;"
hypothetical protein
scn_reactorb_scaffold_135846_9
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14000..14797)
DNA (798bp) protein (266aa)
GNAT family acetyltransferase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B827_9CLOT
GNAT family acetyltransferase {ECO:0000313|EMBL:CDD61342.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
scn_reactorb_scaffold_135846_10
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14781..16295)
DNA (1515bp) protein (505aa)
Amino acid adenylation domain-containing protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KDS8_9BACE
Amino acid adenylation domain-containing protein {ECO:0000313|EMBL:CDB71615.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
peptide synthetase
scn_reactorb_scaffold_135846_11
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16412..16915)
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PR53_9CLOT
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EET88277.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
scn_reactorb_scaffold_135846_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16933..17706)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24004.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
scn_reactorb_scaffold_135846_13
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18011..18739)
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
rluA; ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0R9_9FIRM
scn_reactorb_scaffold_135846_14
unknown

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comp(18772..19389)
DNA (618bp) protein (206aa)

This feature has no annotations

scn_reactorb_scaffold_135846_15
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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19644..20903
DNA (1260bp) protein (420aa)
Putative competence-damage inducible protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GU62_FILAD
competence/damage-inducible protein CinA
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
scn_reactorb_scaffold_135846_16
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21027..21788)
DNA (762bp) protein (254aa)
L-beta-lysine 5,6-aminomutase beta subunit {ECO:0000313|EMBL:EOD01670.1}; EC=5.4.3.3 {ECO:0000313|EMBL:EOD01670.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
L-beta-lysine 5,6-aminomutase beta subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CHA0_9CLOT
cobalamin B12-binding domain-containing protein
scn_reactorb_scaffold_135846_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21788..23344)
DNA (1557bp) protein (519aa)
L-beta-lysine 5,6-aminomutase alpha subunit {ECO:0000313|EMBL:EOD01671.1}; EC=5.4.3.3 {ECO:0000313|EMBL:EOD01671.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
L-beta-lysine 5,6-aminomutase alpha subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSN5_9CLOT
D-lysine 56-aminomutase alpha subunit
scn_reactorb_scaffold_135846_18
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23367..24962)
DNA (1596bp) protein (532aa)
MutS domain protein, family 2 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AYA8_9CLOT
MutS domain protein, family 2 {ECO:0000313|EMBL:EOD01672.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
DNA mismatch repair protein MutS domain-containing protein
scn_reactorb_scaffold_135846_19
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25023..26039)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG80142.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypothetical protein
scn_reactorb_scaffold_135846_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26123..27376)
DNA (1254bp) protein (418aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
Lysine 2,3-aminomutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYL7_9CLOT
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KGG80141.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
scn_reactorb_scaffold_135846_21
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

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comp(27431..28474)
DNA (1044bp) protein (348aa)
L-erythro-3,5-diaminohexanoate dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1YQC8_9CLOT
zinc-containing alcohol dehydrogenase
Tax=BJP_IG2103_ACD39_50_23
scn_reactorb_scaffold_135846_22
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28708..29121
DNA (414bp) protein (138aa)
Calycin-like domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWT8_CLOA9
calycin-like domain-containing protein
Calycin-like domain-containing protein {ECO:0000313|EMBL:AFS77242.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
scn_reactorb_scaffold_135846_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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29260..30777
DNA (1518bp) protein (506aa)
Arginine utilization regulatory protein RocR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSP1_9CLOT
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:EOD01676.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
sigma-54 dependent trancsriptional regulator
scn_reactorb_scaffold_135846_24
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30801..31352
DNA (552bp) protein (184aa)
Nitroreductase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHQ7_CLOPH
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABX42342.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
scn_reactorb_scaffold_135846_25
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31417..32232
DNA (816bp) protein (272aa)
Transcriptional regulator, effector binding domain protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XST4_DESHA
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL18080.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
Displaying 25 items

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