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scn_reactorb_scaffold_135846_23

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 29260..30777

Top 3 Functional Annotations

Value Algorithm Source
Arginine utilization regulatory protein RocR n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CSP1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 475.0
  • Bit_score: 561
  • Evalue 5.50e-157
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:EOD01676.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 475.0
  • Bit_score: 561
  • Evalue 7.70e-157
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 475.0
  • Bit_score: 476
  • Evalue 8.60e-132

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Taxonomy

Caldisalinibacter kiritimatiensis → Caldisalinibacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGAAAGAAAATATTTTGATGCACTTATCAAAGCAATAGAGTATATTGATGACGGTATACACATAATTGACGCTTCAGGCAAGATTGTGTATTATAACCATGCGGCAAAAAAGCTTGATGAAATTGATGTTGAAAAAGCTATCGGCAGACACATACTTGAGGTATATCCTTCGCTTAGCTTTGAAACGAGCACGCTTTTGCAGGTTATTAGAACCTGCAAGCCTCTATATAATATTGAGCAAAATTTTACTAATTATAAAGGTGATAAAATTTCAACAGTAAACACTTCTCTTCCTATAATGTACAACAACAAGGTTGTAGCTGCTGTTGAAATATCTAAAAACATCACTGCTGTCAAAGAATTATCTGAAAGAATAGTTAAGCTGCAAAGTGAATTATATATAAATCACAATAATTCATCCTATAAGCTTGCATCAGAAAATAGTTCCTCCTCATCAAGCAGCTCAGATATAAAAAATAAAAATTCAGCTCATTACACCTTTTTAGATGTAATCGGACATAGCAGAGAAATGCAAAAAATTAAAGCCCTAGGTCTTAAAGCATCGGAGTCAGATTCTCCGGTTTTAATATCAGGTGCTACCGGAACAGGCAAGGAGCTTCTTGTTCAATCTATACACAATTCCAGCAAAAGGAGAAATCAGGCATTTATAGCTCAAAACTGTGCGGCCTTGCCGAATAACCTATTGGAAAGTATATTGTTTGGCACTGTAAAGGGAAGCTTTACAGGAGCTGAAAACCGGGCAGGGCTATTTGAATTGGCTGATGGCGGCACTCTATTTTTAGACGAAGTAAATTCAATGCCTTTAGAGCTTCAAGCAAAGCTTCTTAGAGTTATACAGGACGGCAGATTAAGGCGAGTAGGAGCAAGCTCTACGATAGATATTGATGTTAGAATTATATCAGCCATCAATGTCCCTTTAGACAAGGTATTAGAATTAGGACAGCTTCGAAGCGACCTATTTTATAGATTAAGCGTTATAAGCTTTGAAATACCTTCGCTCAAGGAAAGAGTTCAGGATATTCCTTTATTAGTAGAGTTCTTTATAAAAAAATATAACGAAAAATGCAATAAGTTTTTTTCCAATATTTCAGATGAGGTTTTAAAAATATTTTTGGACTATCACTGGCCGGGAAATGTAAGAGAGCTTGAACATACTATTGAAAGTGTAATCAGCTTATATGATGGCGAAATAATAAGAGAGGAGCATCTTCCATTCCAATTTAAGCATATACAAAACCAAAAAAAGGATTATTCTGTTGATTCAGCTGTTATACAGCCCCTTGATGTATCACTGCAAAGCTATGAAAAGGAGATTATATCCTCTGCGCTCGAAAAGGTTAATTATAATATATCTAAAGCTGCTAAGCTTTTGGATATTCCAAGGCAAACTCTTCAATATAAGATTAAGAAGCTGTCAATTATGTGATATTTATTAATCGCGGACAAAACTATGCACAAAAAATCGGGTAATGTTCCTTTAAATATGGTAGCATAA
PROTEIN sequence
Length: 506
MERKYFDALIKAIEYIDDGIHIIDASGKIVYYNHAAKKLDEIDVEKAIGRHILEVYPSLSFETSTLLQVIRTCKPLYNIEQNFTNYKGDKISTVNTSLPIMYNNKVVAAVEISKNITAVKELSERIVKLQSELYINHNNSSYKLASENSSSSSSSSDIKNKNSAHYTFLDVIGHSREMQKIKALGLKASESDSPVLISGATGTGKELLVQSIHNSSKRRNQAFIAQNCAALPNNLLESILFGTVKGSFTGAENRAGLFELADGGTLFLDEVNSMPLELQAKLLRVIQDGRLRRVGASSTIDIDVRIISAINVPLDKVLELGQLRSDLFYRLSVISFEIPSLKERVQDIPLLVEFFIKKYNEKCNKFFSNISDEVLKIFLDYHWPGNVRELEHTIESVISLYDGEIIREEHLPFQFKHIQNQKKDYSVDSAVIQPLDVSLQSYEKEIISSALEKVNYNISKAAKLLDIPRQTLQYKIKKLSIM*YLLIADKTMHKKSGNVPLNMVA*