ggKbase home page

scn_reactorb_scaffold_155220_3

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2800..4206)

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HTH1_9FUSO similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 468.0
  • Bit_score: 538
  • Evalue 6.10e-150
MATE efflux family protein {ECO:0000313|EMBL:EFS27301.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 468.0
  • Bit_score: 538
  • Evalue 8.50e-150
putative efflux protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 443.0
  • Bit_score: 410
  • Evalue 5.40e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fusobacterium ulcerans → Fusobacterium → Fusobacteriales → Fusobacteriia → Fusobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGTTTAAGATTTTTGAAAAATTATACTCCGTGTCAAATATGGTAAAACAGAAAGACATTATAGGAGAAGTACCAAGCACAAAAGAAGTATATAAAAATGCATTTAACACTGCTTGGCCATCAGCTACAGAAGCCGTTCTAATTGGATTGGTAGGAGCAATAGATACTATGATGGTTGGAGTTTTAGGAACAGGTGCAATAGCAGCAGTAGGAATAACAAACCAGCCTAAGTTTATATTATTAGCAATATTTTTCTCACTTAATGTGGGAGTAACAGCGATTGTTGCAAGGCGTAAGGGACAAAAGGATCGAGAAGGAGCTAACAAATGTTTAAGACAAGCCTTTTTAGTAGCCGTAATCCTGGGTGCAATTCTTTCTATTGTAGGTGTTATATTTGCAAGGCCAATGCTAAAGCTGGCTGGAGCACAAGCAGATATTATTGATAATGCAGTTGCATATTTTCAGATAATATCAATAGGTAACTTCTTTACGGCTATTACAATGACTATAAACGCAGCTCAGCGTGGTGTAGGAAATACTAAAATATCAATGACAACAAATGTTGTAGCTAATGTAGTTAACGTAATTTTTAATTATCTATTGATTAACGGACACTTTGGATTTCCTAAGTTAGGCGTTGCAGGTGCTGCAATTGCAACTGCACTTGGAAACCTAATAGCACTTTTTATGGCGATAAGATCAGTGACAGATGCCGATGGATTTTTGCACATCAAATTTAAATCTAACTGGAAGTTCGACAAGGAGACTATGGGTGGAATTGTAAATATAAGCAGCAGCTCTTTTGTAGAACAGATATGTATGAGAGTTGGATTTTTACTTACAACAATGATTATTGCTTCTTTGGGTACTGTTGCGTTTGCTACACACCAAATATGTATGAATATAGTAAACATAACCTTTACCTTTGGTGATGGTCTGGGAGTAGGTGCTTCCTCTCTGGTAGGACAGAATTTAGGAGCTAAAAGGCCAGATATGGCGACAATATACAGTAAATCAATTCAACGAATAGCATTGACAATAGGATTTATACTGCTTTTAGTATTTGTATTTGGAAGACACTTCCTGGTTGATTTATTTACAGATGAGTTTGATGTTATACAAATGGGGGCAAGTATTTTGGTAATAGTGGCATTTATGTCTCCACTGCAAACTGTTGCTGTGGTTGTAGGAGGTACGCTTAGAGGTGCGGGAGATACAAAATTTGTAGCCTATTCTTCCCTTATAAGCATAGGCATAATCAGACCTTTAACAACATGGCTATTCTGTTATCCATTAGGTTTCGGAATTTTAGGAGCGTGGTATGCATTTATGACAGATCAGATGTTAAGACTTATTATAAATTCACTTAGATTTAGAACAGGAAAATGGACAAAAATTAAAATATAA
PROTEIN sequence
Length: 469
MFKIFEKLYSVSNMVKQKDIIGEVPSTKEVYKNAFNTAWPSATEAVLIGLVGAIDTMMVGVLGTGAIAAVGITNQPKFILLAIFFSLNVGVTAIVARRKGQKDREGANKCLRQAFLVAVILGAILSIVGVIFARPMLKLAGAQADIIDNAVAYFQIISIGNFFTAITMTINAAQRGVGNTKISMTTNVVANVVNVIFNYLLINGHFGFPKLGVAGAAIATALGNLIALFMAIRSVTDADGFLHIKFKSNWKFDKETMGGIVNISSSSFVEQICMRVGFLLTTMIIASLGTVAFATHQICMNIVNITFTFGDGLGVGASSLVGQNLGAKRPDMATIYSKSIQRIALTIGFILLLVFVFGRHFLVDLFTDEFDVIQMGASILVIVAFMSPLQTVAVVVGGTLRGAGDTKFVAYSSLISIGIIRPLTTWLFCYPLGFGILGAWYAFMTDQMLRLIINSLRFRTGKWTKIKI*