ggKbase home page

scn_reactorb_scaffold_155220_4

Organism: 2019_SCN_bioreactor_inoc_reactorb_Clostridiales_33_7

near complete RP 39 / 55 MC: 1 BSCG 45 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(4361..6439)

Top 3 Functional Annotations

Value Algorithm Source
GGDEF domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXC2_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 692.0
  • Bit_score: 350
  • Evalue 3.50e-93
GGDEF domain protein {ECO:0000313|EMBL:EES50835.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.3
  • Coverage: 692.0
  • Bit_score: 350
  • Evalue 4.90e-93
putative ggdef domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 29.9
  • Coverage: 688.0
  • Bit_score: 346
  • Evalue 1.40e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2079
ATGGATTGTAAACAATACGATGAGCAATTGCTAAGGCTTGTTAAAAACAAAGAAGAGATACACTTTTTTCGGGATATAATTACTAAAGAATTATGGCAGGATTACGAGGCACGAAAAGAGTTAATTGAATATGTAATTGATTTTTGCAAAGAAAATGGCTTGGACGAGGCATTAGCGTGGATGTTTTATCATTTAGGCTTTCATTATGATGAGTTTTCAGACTTTAAAAAAGCTATAGAACTGCATAAAGCCGCTAAGGATATTTTTATGGATAGTGGAAATAAAAGAGGGCTTGCTTATGCTTATAACGGACTTTTATCTATTTACTTCAAAAATGGTCAGTATGAGATGGCCAATCAGGTTGCAATATCTGCTATAGATATTGCAAGAGAGCTTAATGATACGGATACCGTAGCAAAGCTGCTTTTAAATGCAAGTATTAACTATACCTTGGCAGATTCGTGCAAAGAAGCAAAGGAGCTATTAGACTATGTCTTAGATGTATATGGAATTGAATGTTTCAATGATACGGGGAAATGTATTTTTTATAAGGCATTAGCAGAAATTGATATAAAGCTTGGAAATTACGATGAGGCTTATAGATCATTAACATATGCAGTTGAAATGAATGACAAGCTTAAACTAAATTTACTTTCTTCAGAAATAAGCAAGCTACTAGGCATGTATTATGCTAAAATAGGAAATATTGAGGAATCGGAGAAGGAATTTGCCAAGTCCTGTGAAATGGCATTCTCAAATATGCATTTAACAGAAGAATGTGAAACATTAATAGAGTGGGCTAAAATTAAGTTTGATTGCGGTCTTGATGAAGAAGCTATGGAGTTCTTAAAAAAGGCATTGAAAATATCTAAGGAAATTAATCTGGAGAGATTAACCAAGGATTCAAGCATGCTTTTGTATAAATATTATAATAAAAATAAGAACTATAAAGAGGCGCTCATAAATCTTGAGTTATATTTAAAATCAGATAAAAAAATCAAAGAATTAAATAATACAGGTTATTTTGGACGATTAGATACAAACAATTTAAAAGATGAAATTAATCTTAATAGGATAATTTATGATAAGACAGAAACGCTTTTCTCAATAGGACAGAAAATTCTTTCAACCTTTGATGTCGAGTTGATGATAGCCAGAGTGTTTGACGACATATCAAAACTGATAGATGTTGAATTTTTTACTATTATAGTATATAATCCAGAGCTGGATGAAATAGTTGTTACAAAAATGGAAGACGGACAGATTGAGGTTTGTGAACCAGTAAATCTTAGTGCTGGCTCCTCATTTTCAAGATATTGCATTAAAAATAAAAAAGCTATCATAATCAACGATATAAGATATGAATATAAAAAGTATGTTGATGAAATTGAGCTTGAAGGCAGAGGAATTGACAGACCTATTTCTAATATATTTCTTCCAATAATGTTTAAGGATGAAATTTTAGGAGTTGTAAGCGTACAAAGCTTAAAGGCAAATGCCTATAATGATGATGACATCAAGCGATTGCGTGTAATATCAAACTATATAGCAATCTCATTAAAAAATGCAGCTCAATATCAAAAAATGGAAGAAGCAGCTATTTATGATAGCTTGACAGGATTTTTAACTAAAAGAGAGCTTATTAAGCTTGGCAATATTCAAATTGAAAAATTTAAAAAGGATTTAACACCTTTCTGTATTTTAATGATAGATATTGATGATTTTAAAAAAGTAAATGATACATATGGACATGTTATTGGAGATAGAGTTCTTAAAGCTCTTGGAACGAAAATACCTAAGCTTATAAGGTCAACTGATTTTATAGGCAGATATGGCGGAGATGAATTTGTGCTTATATGCCCGAATACAAAGCTTGAGGTGGCAGAGAAAATAGGTACAAGAATATGTGAGGCTATTGAAAATGCAAACCTTACATTCAATGACAATGTATCCGTTTCAATATTCATCAGCGTAGGTGCTCACGAATTTAACGATGAAAATTCCAGCATACACAGCGGGATAGATGCGGCAGATTCTAAAATGTATTTATGCAAAAATTCCAAAATTATGAGTAAATAA
PROTEIN sequence
Length: 693
MDCKQYDEQLLRLVKNKEEIHFFRDIITKELWQDYEARKELIEYVIDFCKENGLDEALAWMFYHLGFHYDEFSDFKKAIELHKAAKDIFMDSGNKRGLAYAYNGLLSIYFKNGQYEMANQVAISAIDIARELNDTDTVAKLLLNASINYTLADSCKEAKELLDYVLDVYGIECFNDTGKCIFYKALAEIDIKLGNYDEAYRSLTYAVEMNDKLKLNLLSSEISKLLGMYYAKIGNIEESEKEFAKSCEMAFSNMHLTEECETLIEWAKIKFDCGLDEEAMEFLKKALKISKEINLERLTKDSSMLLYKYYNKNKNYKEALINLELYLKSDKKIKELNNTGYFGRLDTNNLKDEINLNRIIYDKTETLFSIGQKILSTFDVELMIARVFDDISKLIDVEFFTIIVYNPELDEIVVTKMEDGQIEVCEPVNLSAGSSFSRYCIKNKKAIIINDIRYEYKKYVDEIELEGRGIDRPISNIFLPIMFKDEILGVVSVQSLKANAYNDDDIKRLRVISNYIAISLKNAAQYQKMEEAAIYDSLTGFLTKRELIKLGNIQIEKFKKDLTPFCILMIDIDDFKKVNDTYGHVIGDRVLKALGTKIPKLIRSTDFIGRYGGDEFVLICPNTKLEVAEKIGTRICEAIENANLTFNDNVSVSIFISVGAHEFNDENSSIHSGIDAADSKMYLCKNSKIMSK*