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2019_SCN_bioreactor_t1_biofilm_scaffold_59541

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Displaying items 1-30 of 497 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_1
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..386
DNA (384bp) protein (128aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5Z2_CELGA
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEI11007.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_2
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(427..978)
DNA (552bp) protein (184aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JBF2_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KGM01190.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_3
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1205..1885
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZW7_PSEUX
Response regulator {ECO:0000313|EMBL:KGM01191.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
winged helix family two component transcriptional regulator
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_4
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1882..3165
DNA (1284bp) protein (428aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7B5_VERMA
integral membrane sensor signal transduction histidine kinase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_5
unknown

Not on your lists

3252..3641
DNA (390bp) protein (130aa)

This feature has no annotations

2019_SCN_bioreactor_t1_biofilm_scaffold_59541_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3634..4032
DNA (399bp) protein (133aa)
dihydrolipoamide succinyltransferase, partial n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B75581
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV02148.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

4032..5084
DNA (1053bp) protein (351aa)
ApbE family lipoprotein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU66_KYRT2
ApbE family lipoprotein
Tax=RBG_16_RIF_CHLX_70_13_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_8
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5108..5905
DNA (798bp) protein (266aa)
Ferric reductase domain protein protein transmembrane component domain protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WU63_KYRT2
Uncharacterized protein {ECO:0000313|EMBL:KGM14716.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Ferric reductase domain-containing protein transmembrane component domain-containing protein
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

5902..7233
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000375369D
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Tax=RBG_16_RIF_CHLX_69_14_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_10
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7230..7460
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003662539
Ferredoxin {ECO:0000313|EMBL:KIE35462.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7488..8009
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7G6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV78919.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8006..9238
DNA (1233bp) protein (411aa)
HI0933 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A483_CELGA
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EYR62857.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
HI0933 family protein
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_13
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9447..10622
DNA (1176bp) protein (392aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI00030536ED
beta-1,4-xylanase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_14
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10750..11688)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037D3D2A
NADPH:quinone reductase {ECO:0000313|EMBL:KGM02866.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
alcohol dehydrogenase GroES domain-containing protein
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_15
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11799..12347
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003655DDC
MarR family transcriptional regulator {ECO:0000313|EMBL:KJC64562.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
MarR family transcriptional regulator
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12296..13063)
DNA (768bp) protein (256aa)
Dehydrogenase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LV98_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG82640.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
dehydrogenase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13060..14094)
DNA (1035bp) protein (345aa)
Threonine dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N7A0_MICTS
threonine dehydrogenase
Threonine dehydrogenase {ECO:0000313|EMBL:BAJ75532.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14254..15636
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000360AAD3
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETK36829.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
extracellular solute-binding protein family 1
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_19
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15639..16586
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00035C8EF3
ABC transporter permease {ECO:0000313|EMBL:KJK09232.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
sugar ABC transporter permease
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16573..17475
DNA (903bp) protein (301aa)
ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W4G6_9ACTO
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL36223.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC transporter permease
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_21
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17478..17804
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003808239
Uncharacterized protein {ECO:0000313|EMBL:ETK36825.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_22
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17789..18643
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003699769
Amidohydrolase {ECO:0000313|EMBL:CCH18036.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
amidohydrolase 2
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_23
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18640..19638
DNA (999bp) protein (333aa)
Putative oxidoreductase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CDK9_STRBB
Uncharacterized protein {ECO:0000313|EMBL:ETK36823.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
putative oxidoreductase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_24
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19663..20871)
DNA (1209bp) protein (403aa)
Mandelate racemase {ECO:0000313|EMBL:KJQ53262.1}; EC=5.1.2.2 {ECO:0000313|EMBL:KJQ53262.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Racemase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W506_9ACTO
racemase
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20988..21755
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035C2304
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL36225.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_26
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21700..22968)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BWJ3_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ31538.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_27
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23128..23826)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BWJ4_XYLCX
LuxR family two component transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACZ31539.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_28
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23823..25196)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00037F0033
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACZ31540.1}; Flags: Precursor;; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_29
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25323..26141)
DNA (819bp) protein (273aa)
UbiA prenyltransferase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A6I9_CELGA
UbiA prenyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:AEI13477.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_59541_30
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26272..27249)
DNA (978bp) protein (326aa)
alcohol dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B3722
NADPH:quinone reductase {ECO:0000313|EMBL:EZP29266.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
NADPH:quinone reductase
Displaying items 1-30 of 497 in total

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